Papers matching “gene expression programming” 143
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Gradient Information and Regularization for Gene Expression Programming to Develop Data-Driven Physics Closure Models2022 arXiv (Cornell University) preprint Computer Science Evolutionary Algorithms and Applications Open access
Fabian Waschkowski, Haochen Li, Abhishek J. Deshmukh, Temistocle Grenga, Yaomin Zhao, Heinz G. Pitsch, +2 more
4citations -
Gradient Information and Regularization for Gene Expression Programming to Develop Data-Driven Physics Closure Models2024 Flow Turbulence and Combustion article Computer Science Evolutionary Algorithms and Applications Open access
Fabian Waschkowski, Haochen Li, Abhishek J. Deshmukh, Temistocle Grenga, Yaomin Zhao, Heinz G. Pitsch, +2 more
3citations -
Zero-Shot Metabolite Prediction from Gene Expression via Physics-Informed Graph Neural Networks2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Claudio Novella-Rausell, Ton J. Rabelink, Ahmed Essam Mahfouz
0citations -
Inferring spatially transient gene expression pattern from spatial transcriptomic studies2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Jan Kueckelhaus, Jasmin von Ehr, Vidhya Madapusi Ravi, Paulina Will, Kevin Joseph, Jürgen Beck, +4 more
53citations -
DUX4 expression in cancer induces a metastable early embryonic totipotent program2023 Cell Reports article Biochemistry, Genetics and Molecular Biology Pluripotent Stem Cells Research Open access
Andrew A. Smith, Yee Nip, Sean R. Bennett, Danielle C. Hamm, Richard J.L.F. Lemmers, Patrick J. van der Vliet, +3 more
19citations -
Abstract PD6-11: PD6-11 Evaluation of the Sensitivity to Endocrine Therapy Index (SET2,3) in Early Male Breast Cancer: Results from an analysis in the EORTC 10085/TBCRC/BIG/NCTN International Male Breast Cancer Program
Danielle Brandes Zakon, Coralie Poncet, Fátima Cardoso, Neven Anouk, Vicente Valero, Stefan Paul Aebi, +28 more
0citations -
Adjustment of spurious correlations in co-expression measurements from RNA-Sequencing data2023 Bioinformatics article Biochemistry, Genetics and Molecular Biology Gene expression and cancer classification Open access
Ping‐Han Hsieh, Camila M. Lopes‐Ramos, Manuela Zucknick, Geir Kjetil Sandve, Kimberly Glass, Marieke L. Kuijjer
12citations -
Systematic comparison of temporal hepatotoxicant-induced gene network responses across 3 liver test systems2026 Toxicological Sciences article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Tamara Y Danilyuk, Marou Schouten, Elsje J Burgers, Barira Islam, Joost B. Beltman, Peter Bouwman, +2 more
0citations -
De-novoreconstruction and identification of transcriptional gene regulatory network modules differentiating single-cell clusters2023 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Mhaned Oubounyt, Maria L. Elkjaer, Tanja Laske, Alexander G. B. Grønning, Marcus Johannes Moeller, Jan Baumbach
8citations -
STRAIGHT-IN Dual: a platform for dual single-copy integrations of DNA payloads and gene circuits into human induced pluripotent stem cells2026 Nature Biomedical Engineering article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Albert Blanch-Asensio, Deon S. Ploessl, Nathan B. Wang, Christine L. Mummery, Kate E. Galloway, Richard P. Davis
12citations -
AAV-mediated long-term TBX18 expression causes cardiac fibrosis and fails to induce pacemaker activity in rodents2026 Journal of Clinical Investigation article Medicine Cardiac electrophysiology and arrhythmias Open access
Jianan Wang, Mathilde R. Rivaud, Mischa Klerk, Arie R. Boender, Ruud N. Visser, Rinske Sparrius, +16 more
0citations -
The plant longevity gene AHL15 delays leaf senescence by repressing ORESARA1 and cytokinin degradation2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Plant Gene Expression Analysis Open access
Thalia Luden, Petra Amakorová, Ondřej Novák, Salma Balazadeh, Remko Offringa
0citations -
Epigenetic priming of embryonic enhancer elements coordinates developmental gene networks2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Christopher D Todd, Jannat Ijaz, Fereshteh Torabi, Oleksandr Dovgusha, Olivia Cracknell, Tim Lohoff, +9 more
1citations -
RIPK1 Expression Associates With Inflammation in Early Atherosclerosis in Humans and Can Be Therapeutically Silenced to Reduce NF-κB Activation and Atherogenesis in Mice2020 Circulation article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Denuja Karunakaran, My-Anh Nguyen, Michèle Geoffrion, Dianne Vreeken, Zachary Lister, Henry S. Cheng, +20 more
237citations -
Epigenetic priming of mammalian embryonic enhancer elements coordinates developmental gene networks2025 Genome biology article Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Christopher D Todd, Jannat Ijaz, Fereshteh Torabi, Oleksandr Dovgusha, Olivia Cracknell, Tim Lohoff, +9 more
12citations -
Epigenetic priming of mammalian embryonic enhancer elements coordinates developmental gene networks2025 Figshare other Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Christopher D. Todd, Jannat Ijaz, Fereshteh Torabi, Oleksandr Dovgusha, Olivia Cracknell, Tim Lohoff, +10 more
0citations -
Evaluation of multiple transcriptomic gene risk signatures in male breast cancer2021 npj Breast Cancer article Biochemistry, Genetics and Molecular Biology Breast Cancer Treatment Studies Open access
Jane Bayani, Coralie Poncet, Cheryl A. Crozier, Anouk Neven, Tammy Piper, Carrie Cunningham, +30 more
10citations -
Abstract 1498: TGFβ signaling in cancer-associated fibroblasts drives a hepatic gp130-dependent pro-metastatic inflammatory program in CMS4 colorectal cancer2024 Cancer Research conference-abstract Biochemistry, Genetics and Molecular Biology TGF-β signaling in diseases
Subinuer Abudukelimu, Tom J. Harryvan, Stef G. Janson, Imke Stouten, Els M.E. Verdegaal, Lukas J.A.C. Hawinkels
1citations -
Engineering filamentous potato virus X as a platform nanotechnology for nucleic acid gene delivery2025 Scientific Reports article Biochemistry, Genetics and Molecular Biology RNA Interference and Gene Delivery Open access
Bryan A. Duoto, Krister J. Barkovich, Juliane Schuphan, Prashant Mali, Nicole F. Steinmetz
4citations