Papers matching “transcriptional programs” 102
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DYRK1B overexpression promotes senescence-like transcriptional and secretory programs in A549 lung cancer cells2026 Biochemical and Biophysical Research Communications article Medicine Telomeres, Telomerase, and Senescence Open access
Gerrit Wilms, Aaron Babendreyer, Justyna Wozniak, Florian Kraft, Walter B. Becker
0citations -
Heterogenous microglial reactivity contrasts with stable vascular transcriptional programs in mouse models of Alzheimer’s, CADASIL, and Traumatic Brain Injury2026 Nature Communications article Neuroscience Neuroinflammation and Neurodegeneration Mechanisms Open access
Katrine Dahl Bjørnholm, H. Li, G. Mocci, W. Shao, E. Baldisseri, S. B. Rao, +17 more
0citations -
Transcriptional response to host chemical cues underpins the expansion of host range in a fungal plant pathogen lineage2021 The ISME Journal article Agricultural and Biological Sciences Plant pathogens and resistance mechanisms Open access
Stefan Kusch, Justine Larrouy, Heba M. M. Ibrahim, Shantala Mounichetty, Noémie Gasset, Olivier Navaud, +6 more
53citations -
De-novoreconstruction and identification of transcriptional gene regulatory network modules differentiating single-cell clusters2023 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Mhaned Oubounyt, Maria L. Elkjaer, Tanja Laske, Alexander G. B. Grønning, Marcus Johannes Moeller, Jan Baumbach
8citations -
D18-09 The Multiorgan Multicenter Spatial Transcriptomics Atlas Reveals Layered Granuloma Architecture and Cellular Programs Driving Sarcoidosis2026 American Journal of Respiratory and Critical Care Medicine article Medicine Sarcoidosis and Beryllium Toxicity Research
Jannik Ruwisch, Leonard Christian, Stephan Traidl, J Dietrich, J-C Kamp, Janis Casper, +19 more
0citations -
Targeting the Heterogeneous Genomic Landscape in Triple-Negative Breast Cancer through Inhibitors of the Transcriptional Machinery2022 Cancers article Biochemistry, Genetics and Molecular Biology Breast Cancer Treatment Studies Open access
Vera E. van der Noord, Bob van de Water, Sylvia E. Le Dévédec
16citations -
DUX4 expression in cancer induces a metastable early embryonic totipotent program2023 Cell Reports article Biochemistry, Genetics and Molecular Biology Pluripotent Stem Cells Research Open access cited by 1 patent
Andrew A. Smith, Yee Nip, Sean R. Bennett, Danielle C. Hamm, Richard J.L.F. Lemmers, Patrick J. van der Vliet, +3 more
19citations -
snRNA-seq analysis in multinucleated myogenic FSHD cells identifies heterogeneous FSHD transcriptome signatures associated with embryonic-like program activation and oxidative stress-induced apoptosis2023 Human Molecular Genetics article Biochemistry, Genetics and Molecular Biology Muscle Physiology and Disorders Open access
Dongxu Zheng, Annelot Wondergem, Susan L. Kloet, Iris M. Willemsen, Judit Balog, Stephen J. Tapscott, +3 more
15citations -
(Sialyl)Lewis Antigen Expression on Glycosphingolipids, N-, and O-Glycans in Colorectal Cancer Cell Lines is Linked to a Colon-Like Differentiation Program2024 Molecular & Cellular Proteomics article Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Di Wang, Katarina Madunić, Oleg A. Mayboroda, Guinevere S. M. Lageveen‐Kammeijer, Manfred Wuhrer
14citations -
MTGR1 is required to maintain small intestinal stem cell populations2024 Cell Death and Differentiation article Biochemistry, Genetics and Molecular Biology Digestive system and related health Open access
Sarah P. Short, Rachel E. Brown, Zhengyi Chen, Jennifer M. Pilat, Bailey A McElligott, Leslie M. Meenderink, +13 more
6citations -
Disrupting CDK9 activity suppresses triple-negative breast cancer and is enhanced by EGFR Inhibition2026 Cellular Oncology article Biochemistry, Genetics and Molecular Biology Breast Cancer Treatment Studies Open access
Vera E. van der Noord, Ronan P. McLaughlin, Jessica S. Karuntu, Jichao He, A. Mieke Timmermans, Sunita K. C. Basnet, +13 more
2citations -
Loss of the Ash2l subunit of histone H3K4 methyltransferase complexes reduces chromatin accessibility at promoters2022 Scientific Reports article Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Mirna Barsoum, Alexander T. Stenzel, Agnieszka Bochyńska, Chao‐Chung Kuo, Alexander Tsompanidis, Roksaneh Sayadi-Boroujeni, +4 more
18citations -
Histone methyltransferase DOT1L controls state-specific identity during B cell differentiation2021 EMBO Reports article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access cited by 1 patent
Muhammad Assad Aslam, Mir Farshid Alemdehy, Eliza Mari Kwesi‐Maliepaard, Marieta Cagánová, Iris N. Pardieck, Teun van den Brand, +9 more
45citations -
Differential response of luminal and basal breast cancer cells to acute and chronic hypoxia2023 Breast Cancer Research and Treatment article Biochemistry, Genetics and Molecular Biology Cancer, Hypoxia, and Metabolism Open access
Qiuyu Liu, Nasi Liu, Vera E. van der Noord, Wanda van der Stel, Bob van de Water, Erik H.J. Danen, +1 more
2citations -
MGcount: a total RNA-seq quantification tool to address multi-mapping and multi-overlapping alignments ambiguity in non-coding transcripts2022 BMC Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access cited by 2 patents
Andrea Hita, Gilles Brocart, Marc Rehmsmeier, Anna Alemany, Sol Schvartzman
17citations