Papers matching “targeted RNA sequencing” 238
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Targeted exploration of an RNA sequencing dataset of preserved and lesioned oa cartilage-establishing a human oa disease model of chondrocyte hypertrophy2021 Osteoarthritis and Cartilage article Medicine Osteoarthritis Treatment and Mechanisms Open access
Nicoline M. Korthagen, Evelyn Houtman, Rodrigo Coutinho de Almeida, Kavitha Sivasubramaniyan, Rob G. H. H. Nelissen, Y.F. Ramos, +2 more
1citations -
RNA Sequencing Reveals Interacting Key Determinants of Osteoarthritis Acting in Subchondral Bone and Articular Cartilage: Identification of IL11 and CHADL as Attractive Treatment Targets
Margo Tuerlings, Marcella van Hoolwerff, Evelyn Houtman, H. Eka D. Suchiman, Nico Lakenberg, Hailiang Mei, +5 more
61citations -
Single-Nucleus RNA Sequencing Reveals Sex-Specific Renoprotective Mechanisms in Diabetic Kidney Disease2024 Journal of the American Society of Nephrology article Medicine Chronic Kidney Disease and Diabetes
Shuya Liu, Tianran Zhang, Shun Yan Lu, Martin Strauch, Michaël Goedertier, Ivan G. Costa, +3 more
0citations -
Dual RNA sequencing of a co-culture model of Pseudomonas aeruginosa and human 2D upper airway organoids2025 Scientific Reports article Biochemistry, Genetics and Molecular Biology Bacterial biofilms and quorum sensing Open access
Cayetano Pleguezuelos‐Manzano, Wouter A. G. Beenker, Gijs J. F. van Son, Harry Begthel, Gimano D. Amatngalim, Jeffrey Matthijn Beekman, +2 more
18citations -
Recommendations for detection, validation, and evaluation of RNA editing events in cardiovascular and neurological/neurodegenerative diseases2023 Molecular Therapy — Nucleic Acids article Biochemistry, Genetics and Molecular Biology RNA regulation and disease Open access
Korina Karagianni, Alessia Bibi, Alisia Madè, Shubhra Acharya, Mikko Parkkonen, Teodora Barbălată, +7 more
21citations -
Benchmarking computational methods for B-cell receptor reconstruction from single-cell RNA-seq data2022 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tommaso Andreani, Linda M. Slot, Samuel Gabillard, Carsten Strübing, Yaligara Veeranagouda, Aleida M. Bakker, +5 more
14citations -
Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access cited by 4 patents
Ilaria Manfredonia, Chandran Nithin, Almudena Ponce-Salvatierra, Pritha Ghosh, Tomasz K. Wirecki, Tycho Marinus, +5 more
323citations -
SRSF7 controls RNA splicing programs driving triple-negative breast cancer metastasis2026 Journal of Experimental & Clinical Cancer Research article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Nasi Liu, Jurjun J S van der Velde, Esmee Koedoot, Marcel Smid, Vanja de Weerd, John W.M. Martens, +2 more
0citations -
A Combined mRNA- and miRNA-Sequencing Approach Reveals miRNAs as Potential Regulators of the Small Intestinal Transcriptome in Celiac Disease2021 International Journal of Molecular Sciences article Medicine Celiac Disease Research and Management Open access
Ineke L. Tan, Donatella Barisani, Roberto Panceri, Rutger Modderman, Marijn Caroline Visschedijk, Rinse Karel Weersma, +4 more
16citations -
The long non-coding RNA SAMMSON is essential for uveal melanoma cell survival2021 Oncogene article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Shanna Dewaele, Louis Delhaye, Boél De Paepe, Eric James de Bony, Jilke De Wilde, Katrien Vanderheyden, +18 more
30citations -
SIngle cell level Genotyping Using scRna Data (SIGURD)2024 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Martin Graßhoff, Milena Kalmer, Nicolas Chatain, Kim Kricheldorf, Angela Maurer, Ralf Weiskirchen, +2 more
2citations -
Determining off-target effects of splice-switching antisense oligonucleotides using short read RNAseq in neuronally differentiated human induced pluripotent stem cells2025 Human Molecular Genetics article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Elsa C. Kuijper, Linda van der Graaf, Barry A. Pepers, Mariana Guimarães Ramos, Sylvia Korhorn, Lodewijk J.A. Toonen, +5 more
6citations -
Discovery of the order ‘ Quisvirales ’ redefines the evolution of RNA replication and transcription in the phylum Pisuviricota2026 Virus Evolution article Agricultural and Biological Sciences Animal Virus Infections Studies Open access
Alexander E. Gorbalenya, Dmitry V. Samborskiy, Benjamin W. Neuman, Chris Lauber
1citations