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PyLabRobot: An Open-Source, Hardware Agnostic Interface for Liquid-Handling Robots and Accessories2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Decision Sciences Scientific Computing and Data Management Open access
Rick P. Wierenga, Stefan M. Golas, Wilson Ho, Connor W. Coley, Kevin M. Esvelt
0citations -
Interactive data exploration websites for large-scale electrophysiology2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Undergraduate Neuroscience Education and Research Open access
Daniel Birman, Gaelle A. Chapuis, Mayo Faulkner, Cyrille Rossant, Julius Benson, Anne K. Churchland, +17 more
1citations -
Minuteman – A versatile cloud computational platform for collaborative research2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Decision Sciences Scientific Computing and Data Management Open access
Xin Kai Li, Joydeep Charkaborty, Hayden Moore, Alexis Laux‐Biehlmann, Sikander Hayat, Dhawal S. Jain
0citations -
A Multi-omics Data Analysis Workflow Packaged as a FAIR Digital Object2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Decision Sciences Scientific Computing and Data Management Open access
Anna Niehues, Casper de Visser, Fiona A. Hagenbeek, Purva Kulkarni, René Pool, Naama Karu, +7 more
1citations -
The IBEX Imaging Knowledge-Base: A Community Resource Enabling Adoption and Development of Immunofluoresence Imaging Methods2025 eLife preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Ziv Rafael Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner, +55 more
0citations -
Standard-GEM supports reproducible development of genome-scale metabolic models2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Mihail Anton, Eivind Almaas, Famke Bäuerle, Moritz E. Beber, Rui Benfeitas, Sara Benito-Vaquerizo, +30 more
21citations -
The Network Zoo: a multilingual package for the inference and analysis of biological networks2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Marouen Ben Guebila, Tian Wang, Camila M. Lopes‐Ramos, Viola Fanfani, Deborah A. Weighill, Rebekka Burkholz, +17 more
1citations -
The IBEX knowledge-base a community resource enabling adoption and development of immunofluorescence imaging methods2025 eLife preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Ziv Rafael Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner, +55 more
2citations -
The IBEX Knowledge-Base: A Community Resource Enabling Adoption and Development of Immunofluorescence Imaging Methods2026 eLife preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Ziv Rafael Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner, +56 more
0citations -
Integrative learning of disentangled representations from single-cell RNA-sequencing datasets2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Claudio Novella-Rausell, Dorien J.M. Peters, Ahmed Essam Mahfouz
0citations