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PHI-base/phipo: 2026-01-26 January 2026 release2026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Alayne Cuzick, James Seager, Hsinyugithub, Aleix Puig, Kim Rutherford, Martin Larralde, +1 more
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biopragmatics/curies: v0.12.42026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Charles Tapley Hoyt, Chris J Mungall, Jonny L. Saunders, Harshad, Nicolas Matentzoglu, Vincent Emonet
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monarch-initiative/monarch-app: v1.26.0-rc22026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
varun_divya, Kevin Schaper, Vincent Rubinetti, Patrick Golden, Sierra Moxon, Corey Cox, +12 more
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CDE-Mapper: Using Retrieval-Augmented Language Models for Linking Clinical Data Elements to Controlled Vocabularies2025 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Komal Gilani, Marlo Verket, Michel J. Dumontier, Hans‐Peter Brunner‐La Rocca, Visara Urovi
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Improving the Quality of Unstructured Cancer Data Using Large Language Models: A German Oncological Case Study2025 RWTH Publications (RWTH Aachen) article Medicine Biomedical Text Mining and Ontologies Open access
Yongli Mou, J. Lehmkuhl, Nicolas Sauerbrunn, Anja Köchel, Jens Panse, Daniel Truh, +3 more
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Analysis of sustainable development factors in the Republic of Srpska in the context of the regional environment2026 International October Conference on Mining and Metallurgy (IOC) conference-paper Environmental Science Sustainable Development and Environmental Policy Open access
Mitar Perušić, Srećko R. Stopić, Duško Kostić, Vladimir Damjanović, Radislav Filipović, Jelena Vuković, +2 more
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biopragmatics/curies: v0.13.32026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Charles Tapley Hoyt, Chris J Mungall, Jonny Saunders, Harshad, Nicolas Matentzoglu, Vincent Emonet
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monarch-initiative/monarch-app: v1.30.0-rc12026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
varun_divya, Kevin Schaper, Vincent Rubinetti, Patrick Golden, Sierra Moxon, Corey Cox, +17 more
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althonos/pronto: v2.7.32026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Martin Larralde, Philipp A., Alex Henrie, Chris Morris, Daniel Himmelstein, Dave Lawrence, +4 more
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obophenotype/human-phenotype-ontology: 2026-09-01 Release2026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Peter Robinson, Nicole Vasilevsky, Sebastian Köhler, Nicolas Matentzoglu, Harshad, Adam SL Graefe, +19 more
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Recyclability assessment and design for recycling recommendations of end-of-life nmc811 lithium –ion batteries2025 Mining Metallurgy & Exploration article Materials Science Extraction and Separation Processes Open access
Felipe Alejandro García Paz, Christine Nadine Prado Goerlach, Chanchan Li, Monika Keutmann, Tobias Necke, Mohsin Sajjad, +2 more
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