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Gene Regulatory Network Analysis Sign in to save
Papers per year
Papers 66
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Data-based stochastic modeling reveals sources of activity bursts in single-cell TGF-β signaling2022 PLoS Computational Biology article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Niklas Kolbe, Lorenz Hexemer, Lukas-Malte Bammert, Alexander Loewer, Mária Lukáčová-Medviďová, Stefan Legewie
9citations -
De-novoreconstruction and identification of transcriptional gene regulatory network modules differentiating single-cell clusters2023 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Mhaned Oubounyt, Maria L. Elkjaer, Tanja Laske, Alexander G. B. Grønning, Marcus Johannes Moeller, Jan Baumbach
8citations -
gpuZoo: Cost-effective estimation of gene regulatory networks using the Graphics Processing Unit2022 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access cited by 1 patent
Marouen Ben Guebila, Daniel C. Morgan, Kimberly Glass, Marieke L. Kuijjer, Dawn Lisa DeMeo, John Quackenbush
8citations -
GRAND: A database of gene regulatory network models across human conditions2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Marouen Ben Guebila, Camila M. Lopes‐Ramos, Deborah A. Weighill, Abhijeet R. Sonawane, Rebekka Burkholz, Behrouz Shamsaei, +4 more
8citations -
Structural conserved moiety splitting of a stoichiometric matrix2020 Journal of Theoretical Biology article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Susan Ghaderi, Hulda S. Haraldsdóttir, Masoud Ahookhosh, Sylvain Arreckx, Ronan M. T. Fleming
7citations -
A dual-parameter identification approach for data-based predictive modeling of hybrid gene regulatory network-growth kinetics in Pseudomonas putida mt-22020 Bioprocess and Biosystems Engineering article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis
Argyro Tsipa, Jake Alan Pitt, Julio R. Banga, Athanasios Mantalaris
4citations -
Converting networks to predictive logic models from perturbation signalling data with CellNOpt2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Enio Gjerga, Panuwat Trairatphisan, Attila Gábor, Hermann Koch, Francesco Ceccarelli, Aurélien J. F. Dugourd, +2 more
4citations -
Patient-specific Boolean models of signaling networks guide personalized treatments2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Arnau Montagud, Jonas Béal, Luis Tobalina, Pauline Traynard, Vigneshwari Subramanian, Bence Szalai, +6 more
4citations -
Incremental Parameter Estimation of Stochastic State-Based Models2021 IEEE World Symposium on Applied Machine Intelligence and Informatics (SAMI) conference-paper Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis cited by 1 patent
Anke Schmeink, Guido Dartmann, Lejla Begic Fazlic, Thomas R. Vollmer, Arne Peine, Lukas Märtin
3citations -
gpuZoo: Cost-effective estimation of gene regulatory networks using the Graphics Processing Unit2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Marouen Ben Guebila, Daniel C. Morgan, Kimberly Glass, Marieke L. Kuijjer, Dawn Lisa DeMeo, John Quackenbush
2citations -
Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcriptomics data2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Daniel Osorio, Anna Capasso, S. Gail Eckhardt, Uma P. Giri, Alexander J. Somma, Todd M. Pitts, +8 more
2citations -
The Network Zoo: a multilingual package for the inference and analysis of biological networks2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Marouen Ben Guebila, Tian Wang, Camila M. Lopes‐Ramos, Viola Fanfani, Deborah A. Weighill, Rebekka Burkholz, +17 more
1citations
Most active Aachen authors
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Marieke L. Kuijjer 5,654 citations overall10 papers
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Julio Sáez-Rodríguez 48,113 citations overall7 papers
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Martin Hoefer 3,313 citations overall5 papers
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Zhijian Li 14,278 citations overall4 papers
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Alireza Mashaghi 5,535 citations overall4 papers
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Sebastian Walcher 2,013 citations overall4 papers
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Bence Szalai 2,806 citations overall3 papers
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Luis Tobalina 847 citations overall3 papers
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Vigneshwari Subramanian 687 citations overall3 papers
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Charles Tapley Hoyt 2 citations overall3 papers
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Rafael Kramann 16,535 citations overall2 papers
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Ivan G. Costa 12,219 citations overall2 papers
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Alexander Mitsos 10,876 citations overall2 papers
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Christoph Kuppe 6,383 citations overall2 papers
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Elmar G. Weinhold 6,262 citations overall2 papers