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HMDB 5.0: the Human Metabolome Database for 20222021 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access cited by 4 patents
David Scott Wishart, AnChi Guo, Eponine Oler, Fei Wang, Harrison Peters, Raynard Dizon, +27 more
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antiSMASH 6.0: improving cluster detection and comparison capabilities2021 Nucleic Acids Research article Medicine Microbial Natural Products and Biosynthesis Open access cited by 7 patents
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antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation2023 Nucleic Acids Research article Medicine Microbial Natural Products and Biosynthesis Open access cited by 2 patents
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antiSMASH 8.0: extended gene cluster detection capabilities and analyses of chemistry, enzymology, and regulation2025 Nucleic Acids Research article Medicine Microbial Natural Products and Biosynthesis Open access
Kai Blin, Lisa Vader, Judit Szenei, Zachary L. Reitz, Hannah E. Augustijn, José D D Cediel-Becerra, +20 more
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MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters2022 Nucleic Acids Research article Medicine Microbial Natural Products and Biosynthesis Open access cited by 1 patent
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Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access cited by 4 patents
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323citations -
MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration2024 Nucleic Acids Research article Medicine Microbial Natural Products and Biosynthesis Open access
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Deep and accurate detection of m6A RNA modifications using miCLIP2 and m6Aboost machine learning2021 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology RNA modifications and cancer Open access
Nadine Körtel, Cornelia Rücklé, You Zhou, Anke Busch, Peter Hoch-Kraft, F.X. Reymond Sutandy, +12 more
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GRAND: a database of gene regulatory network models across human conditions2021 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access cited by 1 patent
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iFeatureOmega: an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets2022 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
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CAF-1 deposits newly synthesized histones during DNA replication using distinct mechanisms on the leading and lagging strands2023 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Clément Rouillon, Bruna V. Eckhardt, Leonie Kollenstart, Fabian Gruss, Alexander E. E. Verkennis, Inge Rondeel, +14 more
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Broadening the reach and investigating the potential of prime editors through fully viral gene-deleted adenoviral vector delivery2021 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Qian Wang, Jin Liu, Josephine M. Janssen, Francesca Tasca, Hailiang Mei, Manuel A.F.V. Gonçalves
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A critical role for linker DNA in higher-order folding of chromatin fibers2021 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Thomas B. Brouwer, Artur P. Kaczmarczyk, Willem-Jan de Voogd, Margherita M. Botto, Petra Vizjak, Felix Mueller‐Planitz, +1 more
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Mechanical and structural properties of archaeal hypernucleosomes2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Bram Henneman, Thomas B. Brouwer, Amanda M. Erkelens, Gert-Jan Kuijntjes, Clara L. van Emmerik, Ramon A. van der Valk, +5 more
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Direct RNA sequencing enables improved transcriptome assessment and tracking of RNA modifications for medical applications2025 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology RNA modifications and cancer Open access
Charlotte Hewel, Anna Wierczeiko, Johannes Miedema, Johannes H. Friedrich, Stephan Weißbach, Laura Holthöfer, +15 more
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Translation initiation of leaderless and polycistronic transcripts in mammalian mitochondria2023 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access
Cristina Remeş, Anas Khawaja, Sarah F. Pearce, Adam M. Dinan, Shreekara Gopalakrishna, Miriam Cipullo, +8 more
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ZMYM2 restricts 53BP1 at DNA double-strand breaks to favor BRCA1 loading and homologous recombination2022 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Katja Apelt, Seong-Ok Lee, Hsin‐Ru Chan, Martijn S. Luijsterburg, Justin W. C. Leung, Kyle M. Miller
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The mOTUs online database provides web-accessible genomic context to taxonomic profiling of microbial communities2024 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
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Precise and broad scope genome editing based on high-specificity Cas9 nickases2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
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PHF2 regulates homology-directed DNA repair by controlling the resection of DNA double strand breaks2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
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