Papers matching “targeted RNA sequencing” 354
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Targeted exploration of an RNA sequencing dataset of preserved and lesioned oa cartilage-establishing a human oa disease model of chondrocyte hypertrophy2021 Osteoarthritis and Cartilage article Medicine Osteoarthritis Treatment and Mechanisms Open access
Nicoline M. Korthagen, Evelyn Houtman, Rodrigo Coutinho de Almeida, Kavitha Sivasubramaniyan, Rob G. H. H. Nelissen, Y.F. Ramos, +2 more
1citations -
RNA Sequencing Reveals Interacting Key Determinants of Osteoarthritis Acting in Subchondral Bone and Articular Cartilage: Identification of IL11 and CHADL as Attractive Treatment Targets
Margo Tuerlings, Marcella van Hoolwerff, Evelyn Houtman, H. Eka D. Suchiman, Nico Lakenberg, Hailiang Mei, +5 more
61citations -
Integrated risk assessment reveals low biological activity of RNA-based crop protection formulations across plant and non-target systems2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Insect Resistance and Genetics Open access
Moritz Dobrowitsch, Sandra Friedrich, Jonas Noetzold, Maria Bender, K. Rybak, Benjamin Moorlach, +9 more
0citations -
Single-Nucleus RNA Sequencing Reveals Sex-Specific Renoprotective Mechanisms in Diabetic Kidney Disease2024 Journal of the American Society of Nephrology article Medicine Chronic Kidney Disease and Diabetes
Shuya Liu, Tianran Zhang, Shun Yan Lu, Martin Strauch, Michaël Goedertier, Ivan G. Costa, +3 more
0citations -
RNA sequencing reveals interacting key determinants of osteoarthritis acting in subchondral bone and articular cartilage2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Osteoarthritis Treatment and Mechanisms Open access
Margo Tuerlings, Marcella van Hoolwerff, Evelyn Houtman, H. Eka D. Suchiman, Nico Lakenberg, Hailiang Mei, +5 more
6citations -
Establishment and characterization of a new Pseudomonas aeruginosa infection model using 2D airway organoids and dual RNA sequencing2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bacterial biofilms and quorum sensing Open access
Cayetano Pleguezuelos‐Manzano, Wouter A. G. Beenker, Gijs J. F. van Son, Harry Begthel, Gimano D. Amatngalim, Jeffrey Matthijn Beekman, +2 more
4citations -
CRISPR-Cas9 induces large structural variants at on-target and off-target sites in vivo that segregate across generations2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Ida Höijer, Anastasia Emmanouilidou, Rebecka Östlund, Robin van Schendel, Selma Bozorgpana, Lars Feuk, +3 more
0citations -
Recommendations for detection, validation, and evaluation of RNA editing events in cardiovascular and neurological/neurodegenerative diseases2023 Molecular Therapy — Nucleic Acids article Biochemistry, Genetics and Molecular Biology RNA regulation and disease Open access
Korina Karagianni, Alessia Bibi, Alisia Madè, Shubhra Acharya, Mikko Parkkonen, Teodora Barbălată, +7 more
21citations -
Benchmarking computational methods for B-cell receptor reconstruction from single-cell RNA-seq data2022 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tommaso Andreani, Linda M. Slot, Samuel Gabillard, Carsten Strübing, Yaligara Veeranagouda, Aleida M. Bakker, +5 more
14citations -
Benchmarking computational methods for B-cell receptor reconstruction from single-cell RNA-seq data2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tommaso Andreani, Linda M. Slot, Samuel Gabillard, Carsten Struebing, Claus Reimertz, Yaligara Veeranagouda, +6 more
4citations -
Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access cited by 4 patents
Ilaria Manfredonia, Chandran Nithin, Almudena Ponce-Salvatierra, Pritha Ghosh, Tomasz K. Wirecki, Tycho Marinus, +5 more
323citations -
Genome-wide mapping of therapeutically-relevant SARS-CoV-2 RNA structures2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access cited by 5 patents
Ilaria Manfredonia, Chandran Nithin, Almudena Ponce-Salvatierra, Pritha Ghosh, Tomasz K. Wirecki, Tycho Marinus, +5 more
22citations -
Single cell RNA sequence analysis of human bone marrow samples reveals new targets for isolation of skeletal stem cells using DNA-coated gold nanoparticles2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Mesenchymal stem cell research Open access
Elloise Matthews, Stuart Lanham, Maria Eleni Kyriazi, Konstantina Alexaki, Afaf Helmy El-Sagheer, Tom Brown, +5 more
3citations -
The long non-coding RNA SAMMSON is essential for uveal melanoma cell survival2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Shanna Dewaele, Louis Delhaye, Boél De Paepe, Eric James de Bony, Jilke De Wilde, Katrien Vanderheyden, +13 more
0citations -
SRSF7 controls RNA splicing programs driving triple-negative breast cancer metastasis2026 Journal of Experimental & Clinical Cancer Research article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Nasi Liu, Jurjun J S van der Velde, Esmee Koedoot, Marcel Smid, Vanja de Weerd, John W.M. Martens, +2 more
0citations -
A Combined mRNA- and miRNA-Sequencing Approach Reveals miRNAs as Potential Regulators of the Small Intestinal Transcriptome in Celiac Disease2021 International Journal of Molecular Sciences article Medicine Celiac Disease Research and Management Open access
Ineke L. Tan, Donatella Barisani, Roberto Panceri, Rutger Modderman, Marijn Caroline Visschedijk, Rinse Karel Weersma, +4 more
16citations