Papers matching “transcriptomic data analysis” 189
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Genetic regulation of RNA splicing in human pancreatic islets2022 Genome biology article Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Goutham Atla, Sílvia Bonàs‐Guarch, Mirabai Cuenca-Ardura, Anthony Beucher, Daniel J. M. Crouch, Javier García-Hurtado, +26 more
32citations -
The development of the amnion in mice and other amniotes2022 Philosophical Transactions of the Royal Society B Biological Sciences article Biochemistry, Genetics and Molecular Biology Developmental Biology and Gene Regulation Open access cited by 1 patent
Susana M. Chuva de Sousa Lopes, Bernard A.J. Roelen, Kirstie A. Lawson, An Zwijsen
32citations -
Parasite worm antigens instruct macrophages to release immunoregulatory extracellular vesicles2021 Journal of Extracellular Vesicles article Biochemistry, Genetics and Molecular Biology Extracellular vesicles in disease Open access
Amin Zakeri, Bradley Joseph Whitehead, Allan Stensballe, Clarize M. de Korne, Andrew Richard Williams, Bart Everts, +1 more
15citations -
The shifting lipidomic landscape of blood monocytes and neutrophils during pneumonia2024 JCI Insight article Biochemistry, Genetics and Molecular Biology Sphingolipid Metabolism and Signaling Open access
Alex R. Schuurman, Osoul Chouchane, Joe M. Butler, Hessel Peters Sengers, Sebastiaan C M Joosten, Xanthe Brands, +16 more
11citations -
Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering2026 Nature Methods article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Jieran Sun, Kirti Biharie, Peiying Cai, Niklas Müller‐Bötticher, Paul Kießling, Meghan A. Turner, +47 more
9citations -
The C-type lectin DCIR contributes to the immune response and pathogenesis of colorectal cancer2024 Scientific Reports article Immunology and Microbiology Immunotherapy and Immune Responses Open access
Giulia Trimaglio, Tamara Sneperger, Benjamin B. A. Raymond, Nelly Gilles, Emmanuelle Näser, Marie Locard‐Paulet, +12 more
9citations -
Increased Expression and Altered Cellular Localization of Fibroblast Growth Factor Receptor-Like 1 (FGFRL1) Are Associated with Prostate Cancer Progression2022 Cancers article Biochemistry, Genetics and Molecular Biology Fibroblast Growth Factor Research Open access
Lan Yu, Mervi Toriseva, Syeda Afshan, Mario Cangiano, Vidal Fey, Andrew M. Erickson, +12 more
9citations -
The heterogeneous sensitivity of pediatric brain tumors to different oncolytic viruses is predicted by unique gene expression profiles2024 Molecular Therapy Oncology article Biochemistry, Genetics and Molecular Biology Virus-based gene therapy research Open access
Konstantinos Vazaios, Εftychia Stavrakaki, Lisette B. Vogelezang, Jie Ju, Piotr Waranecki, Dennis Serge Metselaar, +13 more
6citations -
Down‐regulation of human long non‐coding RNA LINC01187 is associated with nephropathies2023 Journal of Cellular and Molecular Medicine article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Theodora Manolakou, Valeria Kaltezioti, Niki Prakoura, Panagiotis Kavvadas, Simone Reichelt‐Wurm, Harikleia Gakiopoulou, +10 more
4citations -
Spatial Transcriptomics Reveals Injured Cells, Signature Genes, and Communication Patterns in the Cyst Microenvironment of Polycystic Kidney Disease2025 Journal of the American Society of Nephrology article Biochemistry, Genetics and Molecular Biology Genetic and Kidney Cyst Diseases Open access
Sevtap A. Yasinoglu, Claudio Novella-Rausell, Lisanne E. Wisse, Kyra L. Dijkstra, Ahmed Essam Mahfouz, Hans J. Baelde, +1 more
3citations -
Exploring pathway interactions to detect molecular mechanisms of disease: 22q11.2 deletion syndrome2023 Orphanet Journal of Rare Diseases article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Woosub Shin, Martina Kutmon, Eleni Mina, Thérèse van Amelsvoort, Chris T. Evelo, Friederike Ehrhart
2citations -
Constraint-based modelling of metabolic dysregulation in Gaucher disease: mitochondrial dysfunction and disrupted cholesterol homeostasis2026 Orphanet Journal of Rare Diseases article Medicine Lysosomal Storage Disorders Research Open access
Yanjun Liu, Xi Luo, Samira Ranjbar, Johannes M. F. G. Aerts, Martijn van der Lienden, Andrea Dardis, +1 more
2citations -
DDR1 Regulates Femoral Arterial Calcification in Lower‐Extremity Artery Disease Through NF ‐Kappa B Activation2025 Acta Physiologica article Biochemistry, Genetics and Molecular Biology Dermatological and Skeletal Disorders Open access
Manovriti Thakur, Thibaut Quillard, Nico Angliker, Mark Siegrist, Yvonne J. F. M. Jansen, Yi Yan, +8 more
1citations -
Single-Nucleus RNA Sequencing Reveals Sex-Specific Renoprotective Mechanisms in Diabetic Kidney Disease2024 Journal of the American Society of Nephrology article Medicine Chronic Kidney Disease and Diabetes
Shuya Liu, Tianran Zhang, Shun Yan Lu, Martin Strauch, Michaël Goedertier, Ivan G. Costa, +3 more
0citations -
Cell DiffErential Expression by Pooling (CellDEEP) highlights issues in differential gene expression in scRNA-seq2026 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Yiyi Cheng, Toby Kettlewell, Ross F Laidlaw, Olympia M Hardy, A. McCluskey, Thomas D. Otto, +1 more
0citations -
Sex Differences in Skeletal Muscle Pathology in Patients With Heart Failure and Reduced Ejection Fraction2024 Circulation Heart Failure article Biochemistry, Genetics and Molecular Biology Muscle Physiology and Disorders Open access
Nathanael Wood, Annabel J. Critchlow, Chew Weng Cheng, Sam Straw, Paul William Hendrickse, Marcelo G. Pereira, +5 more
15citations