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Comprehensive comparative assessment of the Arabidopsis thaliana MLO2-calmodulin interaction by various in vitro and in vivo protein-protein interaction assays2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Powdery Mildew Fungal Diseases Open access
Kira von Bongartz, Björn Sabelleck, Anežka Baquero Forero, Hannah Kuhn, Franz Leissing, Ralph Panstruga
1citations -
Robust principal component analysis‐based prediction of protein‐protein interaction hot spots2021 Proteins Structure Function and Bioinformatics article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Divya Sitani, Alejandro Giorgetti, Mercedes Alfonso‐Prieto, Paolo Carloni
17citations -
A De Novo Designed Metalloprotein Displays Variable Thermal Stability and Binding Stoichiometry with Transition Metal Ions2025 ChemBioChem article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Britt Rooijakkers, Gaya Verhagen, Anneloes J. Blok, Ed Zuidinga, Aimee L. Boyle
1citations -
The Interplay of Cholesterol and Ligand Binding in hTSPO from Classical Molecular Dynamics Simulations2021 Molecules article Biochemistry, Genetics and Molecular Biology Lipid Membrane Structure and Behavior Open access
Hien T. T. Lai, Alejandro Giorgetti, Giulia Rossetti, Toan T. Nguyen, Paolo Carloni, Agata Kranjc
10citations -
Targeted complement inhibition using bispecific antibodies that bind local antigens and endogenous complement regulators2024 Frontiers in Immunology article Immunology and Microbiology Complement system in diseases Open access cited by 1 patent
Haiyu Wang, Fleur S. van de Bovenkamp, Douwe J. Dijkstra, Leoni Abendstein, Nicole V. Borggreven, Jos Pool, +10 more
11citations -
Structural Determinants of Mac1 Inhibition: Lessons from Ligand Binding Patterns2026 Zenodo (CERN European Organization for Nuclear Research) article Computer Science Computational Drug Discovery Methods Open access
Verena Weber, Giulia Rossetti, Bernhard Lüscher, Patricia Korn, Sarah Knapp
0citations -
Structural Determinants of Mac1 Inhibition: Lessons from Ligand Binding Patterns2026 Zenodo (CERN European Organization for Nuclear Research) article Computer Science Computational Drug Discovery Methods Open access
Verena Weber, Giulia Rossetti, Bernhard Lüscher, Patricia Korn, Sarah Knapp
0citations -
Accurate Prediction of GPCR Ligand Binding Affinity with Free Energy Perturbation2020 Journal of Chemical Information and Modeling article Computer Science Computational Drug Discovery Methods cited by 4 patents
Francesca Deflorian, Laura Pérez‐Benito, Eelke Bart Lenselink, Miles Congreve, Herman van Vlijmen, Jonathan S. Mason, +2 more
88citations -
The B. subtilis Rok protein is an atypical H-NS-like protein irresponsive to physico-chemical cues2022 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Amanda M. Erkelens, Bert van Erp, Andrés Miguel-Arribas, David Abia, Helena G J Keek, Dorijn Markus, +4 more
27citations -
Engineering Af1521 improves ADP-ribose binding and identification of ADP-ribosylated proteins2020 Nature Communications article Biochemistry, Genetics and Molecular Biology Biochemical and Structural Characterization Open access cited by 2 patents
Kathrin Nowak, Florian Rosenthal, T. Karlberg, Mareike Bütepage, A.G. Thorsell, Birgit Dreier, +8 more
90citations -
Efficient Encounter Complex Formation and Electron Transfer to Cytochrome c Peroxidase with an Additional, Distant Electrostatic Binding Site2020 Angewandte Chemie article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Antonella Di Savino, Johannes M. Foerster, Thijmen La Haye, Anneloes J. Blok, Monika Timmer, G. Matthias Ullmann, +1 more
1citations -
Complementary approaches to obtaining thermodynamic parameters from protein ligand systems-challenges and opportunities2022 EPJ Web of Conferences conference-paper Chemistry thermodynamics and calorimetric analyses Open access
Mona Sarter, Doreen Niether, Simone Wiegand, Jörg Fitter, Andreas Maximilian Stadler
2citations -
A photoaffinity glycan-labeling approach to investigate immunoglobulin glycan-binding partners2023 Glycobiology article Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Miles D. Holborough-Kerkvliet, Greta Mucignato, Sam J. Moons, Venetia Psomiadou, Rohit Sai Reddy Konada, Nichole J. Pedowitz, +11 more
5citations -
Efficient Encounter Complex Formation and Electron Transfer to Cytochrome c Peroxidase with an Additional, Distant Electrostatic Binding Site2020 Angewandte Chemie International Edition article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Antonella Di Savino, Johannes M. Foerster, Thijmen La Haye, Anneloes J. Blok, Monika Timmer, G. Matthias Ullmann, +1 more
18citations -
Automated Flow Peptide Synthesis Enables Engineering of Proteins with Stabilized Transient Binding Pockets2024 ACS Central Science article Biochemistry, Genetics and Molecular Biology Chemical Synthesis and Analysis Open access cited by 1 patent
Anna Charalampidou, Christian Meyners, Satish Gandhesiri, Sebastian J. Pomplun, Bradley L. Pentelute, Frederik Lermyte, +1 more
12citations -
Predictions of the Poses and Affinity of a Ligand over the Entire Surface of a NEET Protein: The Case of Human MitoNEET2023 Journal of Chemical Information and Modeling article Computer Science Computational Drug Discovery Methods Open access
Ke Zuo, Riccardo Capelli, Giulia Rossetti, Rachel Nechushtai, Paolo Carloni
8citations -
The Charge Distribution on a Protein Surface Determines Whether Productive or Futile Encounter Complexes Are Formed2021 Biochemistry article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Antonella Di Savino, Johannes M. Foerster, G. Matthias Ullmann, Marcellus Ubbink
12citations -
Exploring the binding kinetics of intracellular allosteric antagonists for CC chemokine receptor 2 — a key to improve insurmountable antagonism2026 Biochemical Pharmacology article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Yao Yao, Lisa S. den Hollander, Bente T.M. Bleijs, Thomas Härtung, Uwe Grether, Natalia V. Ortiz Zacarı́as, +1 more
1citations