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Biological and Clinical Implications of Gene-Expression Profiling in Diffuse Large B-Cell Lymphoma: A Proposal for a Targeted BLYM-777 Consortium Panel as Part of a Multilayered Analytical Approach
Fleur A. de Groot, Ruben A. L. de Groen, Anke van den Berg, Patty M. Jansen, King Hong Lam, Pim G. N. J. Mutsaers, +12 more
12citations -
A lymph node-to-tumour PDL1 + macrophage circuit antagonizes dendritic cell immunotherapy2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Immunotherapy and Immune Responses Open access
Jenny Sprooten, Isaure Vanmeerbeek, Angeliki Datsi, Jannes Govaerts, Daniel Borràs, Stefan Naulaerts, +17 more
4citations -
1 H-NMR metabolomics-guided DNA methylation mortality predictors2023 medRxiv preprint Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access
Daniele Bizzarri, Marcel J. T. Reinders, Lieke M Kuiper, Marian Beekman, Joris Deelen, Joyce B. J. van Meurs, +7 more
2citations -
Host-microbial interactions at the nasal mucosa in young children and adults: A retrospective, cross-sectional study2026 Cell Reports article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Jesús Reiné, Lisa A. King, Youvika Singh, Wouter A. A. de Steenhuijsen Piters, Beatriz F. Carniel, Carla Solórzano, +27 more
1citations -
Rewired type I IFN signaling is linked to age-dependent differences in COVID-192024 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology interferon and immune responses Open access
Sophia Brumhard, Sebastian Wisniewski, Philipp Georg, David Hillus, Anna Luisa Hiller, Rosario Astaburuaga-García, +25 more
0citations -
Functional and spatial proteomics profiling reveals intra- and intercellular signaling crosstalk in colorectal cancer2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Colorectal Cancer Treatments and Studies Open access
Christina Plattner, Giorgia Lamberti, Peter Blattmann, Alexander Kirchmair, Dietmar Rieder, Zuzana Loncová, +23 more
0citations -
scMEGA: Single-cell Multiomic Enhancer-based Gene Regulatory Network Inference2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Zhijian Li, James Shiniti Nagai, Christoph Kuppe, Rafael Kramann, Ivan G. Costa
0citations -
Metabolic predictors of phenotypic traits can replace and complement measured clinical variables in transcriptome-wide association studies2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Anna Niehues, Daniele Bizzarri, Marcel J. T. Reinders, P. Eline Slagboom, Alain J. van Gool, Erik B. van den Akker, +1 more
0citations -
INNV-35. Artificial intelligence in Neuro-Oncology: Mapping the field2025 Neuro-Oncology article Medicine Artificial Intelligence in Healthcare and Education Open access
Sebastian Voigtlaender, Thomas Allen Nelson, Philipp Karschnia, Eugene Vaios, Michelle M. Kim, Philipp Lohmann, +7 more
0citations -
A framework for employing longitudinally collected multicenter electronic health records to stratify heterogeneous patient populations on disease history2022 Journal of the American Medical Informatics Association article Computer Science Machine Learning in Healthcare Open access
Marc P. Maurits, Ilya Korsunsky, Soumya Raychaudhuri, Shawn N. Murphy, Jordan W. Smoller, Scott T. Weiss, +8 more
13citations -
Highly Repeatable Tissue Proteomics for Kidney Transplant Pathology: Technical and Biological Validation of Protein Analysis using LC-MS/MS2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Chemistry Advanced Proteomics Techniques and Applications Open access
Rianne Hofstraat, Kristina Marx, Renata Blatnik, Nike Claessen, Hessel Peters Sengers, Sandrine Florquin, +2 more
3citations -
Highly Repeatable Tissue Proteomics for Kidney Transplant Pathology: Technical and Biological Validation of Protein Analysis Using Liquid Chromatography-Tandem Mass Spectrometry/Mass Spectrometry (LC-MS/MS)2026 Laboratory Investigation article Chemistry Advanced Proteomics Techniques and Applications Open access
Rianne Hofstraat, Kristina Marx, Renata Blatnik, Nike Claessen, Hessel Peters Sengers, Sandrine Florquin, +2 more
3citations -
Rheumatic Digital Twin: Proposed Machine Learning–Based Multimodal Framework to Inform Clinical Decision-Making2026 Journal of Medical Internet Research article Computer Science Machine Learning in Healthcare Open access
Daniyal Selani, Rachel Knevel, Marcel J. T. Reinders, Erik B. van den Akker
0citations -
PlantMetWiki: a FAIR knowledge graph for plant metabolic pathway cross-species representation and integration2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Elena Del Pup, M Muller, Marvin Martens, Egon Willighagen, Marnix H. Medema, Denise Slenter, +1 more
1citations -
INSIGHT: An integrated framework for safe and sustainable chemical and material assessment2025 Computational and Structural Biotechnology Journal article Environmental Science Chemistry and Chemical Engineering Open access
Angela Serra, Dimitrios Zouraris, Alexandra Schaffert, Marcella Torres Maia, Periklis Tsiros, Ishita Virmani, +44 more
24citations -
A Multiomic Network Approach to Uncover Disease Modifying Mechanisms of Inborn Errors of Metabolism2025 Journal of Inherited Metabolic Disease article Biochemistry, Genetics and Molecular Biology Metabolism and Genetic Disorders Open access
Aaron S. Bender, Pablo Ranea‐Robles, Evan G. Williams, Mina Mirzaian, J. Alexander Heimel, Christiaan Nicolaas Levelt, +6 more
0citations -
Phenotype-Agnostic Molecular Subtyping of Neurodegenerative Disorders: The Cincinnati Cohort Biomarker Program (CCBP)2020 Frontiers in Aging Neuroscience article Medicine Dementia and Cognitive Impairment Research Open access
Andrea Sturchio, Luca Marsili, Joaquín A. Vizcarra, Alok Kumar Dwivedi, Marcelo Andrés Kauffman, Andrew P. Duker, +18 more
38citations