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Unlocking New Frontiers in Cell Signaling and Communication and Fostering New Collaborative Interactions and Scientific Initiatives: Lessons Learned from the International Cellular Communication Network Society (ICCNS) Workshop0citations
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The Network Zoo: a multilingual package for the inference and analysis of biological networks2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Marouen Ben Guebila, Tian Wang, Camila M. Lopes‐Ramos, Viola Fanfani, Deborah A. Weighill, Rebekka Burkholz, +17 more
1citations -
Mapping the cellular response to electron transport chain inhibitors reveals selective signaling networks triggered by mitochondrial perturbation2021 Archives of Toxicology article Biochemistry, Genetics and Molecular Biology Mitochondrial Function and Pathology Open access
Wanda van der Stel, Huan Yang, Nanette G. Vrijenhoek, Johannes P. Schimming, Giulia Callegaro, Giada Carta, +10 more
18citations -
On the flexibility of the cellular amination network in E coli2022 eLife article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Helena Schulz-Mirbach, Alexandra Müller, Tong Wu, Pascal Pfister, Lennart Schada von Borzyskowski, Tobias J. Erb, +2 more
29citations -
On the flexibility of the cellular amination network in E. coli2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Helena Schulz-Mirbach, Alexandra Müller, Tong Wu, Pascal Pfister, Lennart Schada von Borzyskowski, Tobias J. Erb, +2 more
0citations -
Expression and biological function of the cellular communication network factor 5 (CCN5) in primary liver cells2023 Journal of Cell Communication and Signaling article Biochemistry, Genetics and Molecular Biology Connective Tissue Growth Factor Research Open access
Erawan Borkham‐Kamphorst, Steffen K. Meurer, Ralf Weiskirchen
5citations -
Systematic transcriptome-based comparison of cellular adaptive stress response activation networks in hepatic stem cell-derived progeny and primary human hepatocytes2021 Toxicology in Vitro article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Bas ter Braak, Marije Niemeijer, Ruben Boon, Celine Parmentier, Audrey Baze, Lysiane Richert, +4 more
14citations -
Author response: On the flexibility of the cellular amination network in E coli2022 peer-review Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Helena Schulz-Mirbach, Alexandra Müller, Tong Wu, Pascal Pfister, Lennart Schada von Borzyskowski, Tobias J. Erb, +2 more
0citations -
Utilizing gene co-expression networks with the rat kidney TXG-MAPr tool to enhance safety assessment, biomarker identification and human translation2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Steven J. Kunnen, Giulia Callegaro, Jeffrey J. Sutherland, Panuwat Trairatphisan, Hugo W van Kessel, Lukas S. Wijaya, +11 more
1citations -
Cell type heterogeneity in gene co-expression networks: implications for toxicological research2025 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Imke B. Bruns, Yingxue Li, James L. Stevens, Bob van de Water, Giulia Callegaro
3citations -
Modeling neuron-astrocyte interactions in neural networks using distributed simulation2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neural dynamics and brain function Open access
Han-Jia Jiang, Jugoslava Aćimović, Tiina Manninen, Iiro Ahokainen, Jonas Stapmanns, Mikko Lehtimäki, +4 more
4citations -
Invasive cancer cells soften collagen networks and disrupt stress-stiffening via volume exclusion, contractility and adhesion2025 Acta Biomaterialia article Biochemistry, Genetics and Molecular Biology Cellular Mechanics and Interactions Open access
Irène Nagle, Margherita Tavasso, Ankur Bordoloi, Iain Muntz, Gijsje Hendrika Koenderink, Pouyan E. Boukany
3citations -
Invasive cancer cells soften collagen networks and disrupt stress-stiffening via volume exclusion, contractility and adhesion2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cellular Mechanics and Interactions Open access
Irène Nagle, Margherita Tavasso, Ankur Bordoloi, Iain Muntz, Gijsje Hendrika Koenderink, Pouyan E. Boukany
1citations