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Single-cell immune profiling reveals novel thymus-seeding populations, T cell commitment, and multi-lineage development in the human thymus2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Martijn Cordes, Kirsten Canté-Barrett, Erik B. van den Akker, Federico A. Moretti, Szymon M. Kiełbasa, Sandra A. Vloemans, +6 more
5citations -
Tviblindi algorithm identifies branching developmental trajectories of human B cell development2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Marina Bakardjieva, Jan Stuchlý, Ondřej Pelák, Marjolein W. J. Wentink, Hana Glier, David Novák, +6 more
1citations -
Dissecting CD8+ T cell pathology of severe SARS-CoV-2 infection by single-cell epitope mapping2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine SARS-CoV-2 and COVID-19 Research Open access
Felix Schreibing, Monica Toft Hannani, Fabio Ticconi, Eleanor Fewings, James Shiniti Nagai, Matthias Begemann, +18 more
7citations -
Identification and characterization of an immunodominant SARS-CoV-2-specific CD8 T cell response2020 preprint Biochemistry, Genetics and Molecular Biology vaccines and immunoinformatics approaches Open access
Anastasia Gangaev, Steven L. C. Ketelaars, Olga I. Isaeva, Sanne Patiwael, Anna Dopler, Kelly Hoefakker, +14 more
4citations -
Efficient formation and maintenance of humoral and CD4 T cell immunity targeting the viral capsid in acute-resolving hepatitis E infection2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Hepatitis Viruses Studies and Epidemiology Open access
Benedikt Csernalabics, Mircea Stefan Marinescu, Lars Maurer, Lara Kelsch, Jill Werner, Katharina Baumann, +10 more
1citations -
EOMES and IL-10 regulate anti-tumor activity of PD-1 + CD4 + T-cells in B-cell Non-Hodgkin lymphoma2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Philipp M. Roessner, Laura Llaó Cid, Ekaterina Lupar, Tobias Roider, Marie Bordas, Christoph Schifflers, +10 more
4citations -
Neonatal liver niches program T cell tolerance2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Eva-Lena Stange, Trong-Hieu Nguyen, D. Borrero Mendoza, Aiara Lobo Gomes, Marlene Sophia Kohlhepp, Jonas Pes, +22 more
0citations -
Mapping human natural killer cell development in pediatric tonsil by imaging mass cytometry and high-resolution microscopy2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Immune Cell Function and Interaction Open access
Everardo Hegewisch-Solloa, Janine E. Melsen, Hiranmayi Ravichandran, André F. Rendeiro, Aharon G. Freud, Bethany L. Mundy-Bosse, +8 more
5citations -
Mapping human natural killer cell development in tonsil2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Immune Cell Function and Interaction Open access
Everardo Hegewisch-Solloa, Janine E. Melsen, Ansel P. Nalin, Hiranmayi Ravichandran, André F. Rendeiro, Bethany L. Mundy-Bosse, +9 more
0citations -
Investigating T cell Recruitment in Atherosclerosis using a novel Human 3D Tissue-Culture Model reveals the role of CXCL12 in intraplaque neovessels2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Laura Parma, Nadja Sachs, Zhaolong Adrian Li, Nikola Sobczak, Bram Slütter, Lars Mäegdefessel, +3 more
1citations -
Fatty acid desaturation by stearoyl-CoA desaturase-1 controls regulatory T cell differentiation and autoimmunity2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Elien Grajchen, Melanie Loix, Paulien Baeten, Beatriz F. Côrte‐Real, Ibrahim Hamad, Mansour Haidar, +14 more
4citations -
B cells maintain the homeostasis of splenic marginal zone antigen-presenting cells to promote the anti-viral CD8 + T cell response2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Immunotherapy and Immune Responses Open access
Filiz Demircik, Emmanouil Stylianakis, Matthias Klein, David Alejandro Bejarano, Abdelrahman Elwy, Anna Ebering, +16 more
1citations -
Autoantibody subclass predominance is not driven by aberrant class switching or impaired B cell development2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Myasthenia Gravis and Thymoma Open access
Laurent M. Paardekooper, Yvonne E. Fillié‐Grijpma, Alita J. van der Sluijs‐Gelling, Mihaela Zlei, Remco van Doorn, Maarten H. Vermeer, +6 more
0citations -
Solid tumor-on-chip model for efficacy and safety assessment of CAR-T cell therapy2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine CAR-T cell therapy research Open access
Tengku Ibrahim Maulana, Claudia Teufel, Madalena Cipriano, Lisa Lazarevski, Francijna E. van den Hil, Valeria V. Orlova, +4 more
2citations -
T cell correction pipeline for Inborn Errors of Immunity2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Katariina Mamia, Solrun Kolbeinsdottir, Zhuokun Li, Kornel Labun, Anna Zofia Komisarczuk, Salla Keskitalo, +22 more
1citations -
Interleukin-6 restricts pre-thymic T cell lineage commitment of progenitors driving loss of SIV control2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology HIV Research and Treatment Open access
Saleem Anwar, Naseem Sadek, Christian Michel Beusch, Ahmet F. Coskun, Mohamed S. Abdel-Hakeem, R. Paul Johnson, +7 more
0citations -
Single cell, whole embryo phenotyping of pleiotropic disorders of mammalian development2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Xingfan Huang, Jana Henck, Chengxiang Qiu, Varun K. A. Sreenivasan, Saranya Balachandran, Rose Yinghan Behncke, +27 more
5citations -
A third vaccination with a single T cell epitope protects against SARS-CoV-2 infection in the absence of neutralizing antibodies2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine SARS-CoV-2 and COVID-19 Research Open access
Iris N. Pardieck, Esmé T.I. van der Gracht, Dominique M. B. Veerkamp, Felix M. Behr, Suzanne van Duikeren, Guillaume Beyrend, +20 more
1citations -
Reassessing Human Genetic Diversity in T Cell Studies.2023 Research Square preprint Biochemistry, Genetics and Molecular Biology Race, Genetics, and Society Open access
Ferenc A. Scheeren, Roderick C. Slieker, Daniël O. Warmerdam, Maarten H. Vermeer, Remco van Doorn, Mirjam H.M. Heemskerk
0citations -
Trsp is required by regulatory T cells to prevent lethal autoimmunity in mice2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Justin Jacobse, Jennifer M. Pilat, Aaron Kwag, Zaryab Aziz, Channing Chi, M. Diana Neely, +13 more
0citations