Integrative single-cell analysis

• Molecular mechanisms of human overgrowth and use of omics in its diagnostics: chances and challenges

  2024 Frontiers in Genetics article Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access

  5

  citations
• Female Gene Networks Are Expressed in Myofibroblast-Like Smooth Muscle Cells in Vulnerable Atherosclerotic Plaques

  2023 Arteriosclerosis Thrombosis and Vascular Biology article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access

  37

  citations
• Best practices for single-cell analysis across modalities

  2023 Nature Reviews Genetics review Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 7 patents

  1,043

  citations
• Female gene networks are expressed in myofibroblast-like smooth muscle cells in vulnerable atherosclerotic plaques

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access

  5

  citations
• Learning to distinguish progressive and non-progressive ductal carcinoma in situ

  2022 Nature reviews. Cancer review Medicine Breast Lesions and Carcinomas

  51

  citations
• scMoC: single-cell multi-omics clustering

  2022 Bioinformatics Advances article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  11

  citations
• Intersecting single-cell transcriptomics and genome-wide association studies identifies crucial cell populations and candidate genes for atherosclerosis

  2021 European Heart Journal Open article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access

  77

  citations
• How a cell decides its own fate: a single-cell view of molecular mechanisms and dynamics of cell-type specification

  2021 Biochemical Society Transactions article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  7

  citations
• Intersecting single-cell transcriptomics and genome-wide association studies identifies crucial cell populations and candidate genes for atherosclerosis

  2021 medRxiv preprint Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access

  4

  citations
• Single‐cell omics: Overview, analysis, and application in biomedical science

  2021 Journal of Cellular Biochemistry article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  43

  citations
• Proteomics for Low Cell Numbers: How to Optimize the Sample Preparation Workflow for Mass Spectrometry Analysis

  2021 Journal of Proteome Research article Chemistry Advanced Proteomics Techniques and Applications Open access

  37

  citations
• scMoC: Single-Cell Multi-omics clustering

  2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  3

  citations
• Heterogeneity and ‘memory’ in stem cell populations

  2020 Physical Biology article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access

  8

  citations
• Heterogeneity and ‘memory’ in stem cell populations

  2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Developmental Biology and Gene Regulation Open access

  0

  citations
• SpaGE: Spatial Gene Enhancement using scRNA-seq

  2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 4 patents

  223

  citations
• A community-based transcriptomics classification and nomenclature of neocortical cell types

  2020 Nature Neuroscience article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  30

  citations
• SpaGE: Spatial Gene Enhancement using scRNA-seq

  2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 4 patents

  7

  citations

17 results