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Papers per year
Papers 102
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A patient-centric knowledge graph approach to prioritize mutants for selective anti-cancer targeting2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Marina Gorostiola González, Adriaan P. IJzerman, Gerard J. P. van Westen
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Integrative analysis of CAKUT multi-omics data2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Jumamurat R. Bayjanov, Cenna Doornbos, Ozan Özışık, Woosub Shin, Núria Queralt-Rosiñach, Daphne Wijnbergen, +7 more
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Additional file 3 of Whole blood co-expression modules associate with metabolic traits and type 2 diabetes: an IMI-DIRECT study2020 Figshare dataset Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Valborg Guðmundsdóttir, Helle Pedersen, Gianluca Mazzoni, Kristine Højgaard Allin, Anna Artati, Joline W. J. Beulens, +49 more
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iSODA: A Comprehensive Tool for Integrative Omics Data Analysis in Single- and Multi-Omics Experiments2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Damien Olivier‐Jimenez, Rico J. E. Derks, Oscar Harari, Carlos C Cruchaga, Muhammad Asri Mohd Ali, Alessandro Ori, +5 more
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Peer Review Report For: Systems Biology in ELIXIR: modelling in the spotlight [version 2; peer review: 2 approved, 1 approved with reservations]2024 peer-review Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Vitor Martins dos Santos, Mihail Anton, Barbara Szomolay, Marek Ostaszewski, Ilja Arts, Rui Benfeitas, +32 more
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Peer Review Report For: Systems Biology in ELIXIR: modelling in the spotlight [version 1; peer review: 1 approved, 2 approved with reservations]2022 peer-review Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Vitor Martins dos Santos, Mihail Anton, Barbara Szomolay, Marek Ostaszewski, Ilja Arts, Rui Benfeitas, +30 more
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Peer Review Report For: Systems Biology in ELIXIR: modelling in the spotlight [version 1; peer review: 1 approved, 2 approved with reservations]2023 peer-review Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Vitor Martins dos Santos, Mihail Anton, Barbara Szomolay, Marek Ostaszewski, Ilja Arts, Rui Benfeitas, +30 more
0citations -
Peer Review Report For: Systems Biology in ELIXIR: modelling in the spotlight [version 1; peer review: 1 approved, 2 approved with reservations]2023 peer-review Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Vitor Martins dos Santos, Mihail Anton, Barbara Szomolay, Marek Ostaszewski, Ilja Arts, Rui Benfeitas, +30 more
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Hyperpathway: visualizing organization of pathway-molecule enriched interactions in omics studies via hyperbolic bipartite network embedding2026 npj Systems Biology and Applications article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Ilyes Abdelhamid, Ziheng Liao, Yuchi Liu, Armel Lefebvre, Carlo Vittorio Cannistraci
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Context-dependent molecular responses to heterogeneous metabolic disease traits2026 medRxiv preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Theodora-Dafni Michalettou, Ana Viñuela, Natalie N. Atabaki, Juan J. Fernandez-Tajes, Mun-Gwan Hong, Jonathan Adam, +33 more
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Zero-Shot Metabolite Prediction from Gene Expression via Physics-Informed Graph Neural Networks2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Claudio Novella-Rausell, Ton J. Rabelink, Ahmed Essam Mahfouz
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MSstatsBioNet: Integrating Statistical Analyses with Prior Knowledge Biomolecular Networks for Quantitative Proteomics and Phosphoproteomics2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Anthony Wu, Devon Kohler, Pruthvi Prakash Navada, Julia E. Robbins, Gabriel E. Boyle, Alex Boshart, +7 more
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PlantMetWiki: a FAIR knowledge graph for plant metabolic pathway cross-species representation and integration2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Elena Del Pup, M Muller, Marvin Martens, Egon Willighagen, Marnix H. Medema, Denise Slenter, +1 more
0citations
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