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Experimental and computational technologies to dissect the kidney at the single-cell level2020 Nephrology Dialysis Transplantation article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Christoph Kuppe, Javier Perales-Patón, Julio Sáez-Rodríguez, Rafael Kramann
12citations -
Single‐cell omics: Overview, analysis, and application in biomedical science2021 Journal of Cellular Biochemistry article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Catarina M. Stein, Ralf Weiskirchen, Frédérik Damm, Paulina M. Strzelecka
43citations -
Cell-type-specific damage scores reveal kidney and liver disease trajectories in single-cell and spatial transcriptomics2026 Cell Genomics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tsimafei Padvitski, Paula Unger Avila, He Chen, Cem Özel, Fabian Braun, Marie-Kristin Kroll, +16 more
1citations -
Proteomics for Low Cell Numbers: How to Optimize the Sample Preparation Workflow for Mass Spectrometry Analysis2021 Journal of Proteome Research article Chemistry Advanced Proteomics Techniques and Applications Open access
Sara Kassem, Kyra van der Pan, Anniek L. de Jager, Brigitta A. E. Naber, Inge F. de Laat, Alesha Louis, +3 more
37citations -
Multi-omic analyses in immune cell development with lessons learned from T cell development2023 Frontiers in Cell and Developmental Biology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Martijn Cordes, Karin Pike‐Overzet, Erik B. van den Akker, Frank J. T. Staal, Kirsten Canté-Barrett
9citations -
Quantitative proteomics of small numbers of closely-related cells: Selection of the optimal method for a clinical setting2022 Frontiers in Medicine article Chemistry Advanced Proteomics Techniques and Applications Open access
Kyra van der Pan, Sara Kassem, Indu Khatri, Arnoud H. de Ru, George M. C. Janssen, Rayman T.N. Tjokrodirijo, +15 more
6citations -
Targeted Co-delivery of Tumor Antigen and α-Galactosylceramide to CD141+ Dendritic Cells Induces a Potent Tumor Antigen-Specific Human CD8+ T Cell Response in Human Immune System Mice2020 Frontiers in Immunology article Immunology and Microbiology Immunotherapy and Immune Responses Open access
Jing Huang, Jing Zhou, Reem Ghinnagow, Toshiyuki Seki, Sho Iketani, Daphnée Soulard, +5 more
27citations -
Serum proteomics of adults with acute liver failure provides mechanistic insights and attractive prognostic biomarkers2025 JHEP Reports article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Katharina Remih, Franziska-Maria Hufnagel, Anna Sophie Karl, Valerie L. Durkalski‐Mauldin, William M. Lee, Constantine Jason Karvellas, +14 more
4citations -
Unraveling the Complexity of the Cancer Microenvironment With Multidimensional Genomic and Cytometric Technologies2020 Frontiers in Oncology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 2 patents
Natasja L. De Vries, Ahmed Essam Mahfouz, Frits Koning, Noel F.C.C. de Miranda
60citations -
Human umbilical cord mesenchymal stem cell-derived treatment of severe pulmonary arterial hypertension2022 Nature Cardiovascular Research article Medicine Mesenchymal stem cell research Open access cited by 3 patents
Georg Hansmann, Philippe Chouvarine, Franziska Diekmann, Martin A. Giera, Markus Ralser, Michael Mülleder, +4 more
23citations -
Community-driven advances in computational mass spectrometry: The perspective of EuBIC-MS members2026 Journal of Proteomics article Chemistry Advanced Proteomics Techniques and Applications Open access
Dirk Winkelhardt, Julia Patricia Schessner, Sven Berres, Alireza Nameni, Armin Soleymaniniya, Ayla Schröder, +17 more
0citations -
Intratumoral heterogeneity in human hepatocellular carcinoma – a protein-based approach2023 Zeitschrift für Gastroenterologie article Medicine Hepatocellular Carcinoma Treatment and Prognosis
Thomas Ritz, Jana Baues, Oliver Krenkel, Jovan Tanevski, Julio Sáez-Rodríguez, Peter Schirmacher, +1 more
0citations -
Three decades of advancements in osteoarthritis research: insights from transcriptomic, proteomic, and metabolomic studies2023 Osteoarthritis and Cartilage article Medicine Osteoarthritis Treatment and Mechanisms Open access
Muhammad Farooq Rai, Kelsey H. Collins, Annemarie Lang, Tristan Maerz, Jeroen Geurts, Cristina Ruíz‐Romero, +9 more
54citations -
Inflammatory and tolerogenic myeloid cells determine outcome following human allergen challenge2023 The Journal of Experimental Medicine article Medicine Allergic Rhinitis and Sensitization Open access
Astrid L. Voskamp, Tamar Tak, Maarten L. Gerdes, Roberta Menafra, Ellen Duijster, Simon P. Jochems, +11 more
7citations -
The Stroma Liquid Biopsy Panel Contains a Stromal-Epithelial Gene Signature Ratio That Is Associated with the Histologic Tumor-Stroma Ratio and Predicts Survival in Colon Cancer2021 Cancers article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Cor J. Ravensbergen, Matthew Kuruc, Meaghan Polack, Stijn Crobach, Hein Putter, Hans A. J. Gelderblom, +3 more
12citations -
Dissecting Normal and Abnormal Human Kidney Development Using Multiomics2025 Journal of the American Society of Nephrology article Biochemistry, Genetics and Molecular Biology Renal and related cancers Open access
Luna S. Klomp, Lampros Mavrommatis, Fanny Oliveira Arcolino, Hildo C. Lantermans, Elena N. Levtchenko, Christoph Kuppe, +1 more
1citations