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WALDO: community-Wide Annotation of γδ Lymphocytes in single-cell Data, Openly benchmarked2026 Zenodo (CERN European Organization for Nuclear Research) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Farid Keramati, Moosa Rezwani, Likai Tan, David Hamilton, Zheng Song, Tao Yang, +10 more
0citations -
Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples2021 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Jutte J.C. de Vries, Julianne Rose Brown, Nicole Fischer, Igor A. Sidorov, Sofia Morfopoulou, Jiabin Huang, +24 more
2citations -
Automated segmentation and quantitative analysis of organelle morphology, localization and content using CellProfiler2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Sebastiaan N. J. Laan, Richard J. Dirven, Jeroen C.J. Eikenboom, Ruben Bierings
0citations -
XomicsToModel: Omics data integration and generation of thermodynamically consistent metabolic models2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
German Preciat, Agnieszka B. Wegrzyn, Ines Thiele, Thomas Hankemeier, Ronan M. T. Fleming
10citations -
Intelligent Anomaly Detection for Lane Rendering Using Transformer with Self-Supervised Pre-Training and Customized Fine-Tuning2023 arXiv (Cornell University) preprint Computer Science Anomaly Detection Techniques and Applications Open access
Yongqi Dong, Xingmin Lu, Ruohan Li, Wei Song, Bart van Arem, Haneen Farah
0citations -
DeepADEMiner: A Deep Learning Pharmacovigilance Pipeline for Extraction and Normalization of Adverse Drug Effect Mentions on Twitter2020 medRxiv preprint Pharmacology, Toxicology and Pharmaceutics Pharmacovigilance and Adverse Drug Reactions Open access
Arjun Magge, Elena Viktorovna Tutubalina, Zulfat Miftahutdinov, Ilseyar Alimova, Anne R. Dirkson, Suzan Verberne, +2 more
7citations -
Exploring the impact of read clustering thresholds on RADseq-based systematics: an empirical example from European amphibians2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Loïs Rancilhac, Florent Sylvestre, Carl R. Hutter, Jan W. Arntzen, Wiesław Babik, Pierre‐André Crochet, +11 more
6citations -
AlphaFold 3 captures oligomeric states and interaction dynamics of MLO ion channels2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Jan Hübbers, Chandan Kumar Das, Alexander Speck, Myriam Elisabeth Fuerst, Hanna Simon, Marie Laufens, +4 more
1citations -
Euclid preparation - XLVIII. The pre-launch Science Ground Segment simulation framework2024 arXiv (Cornell University) preprint Physics and Astronomy Astronomy and Astrophysical Research Open access
Euclid Collaboration, S Serrano, Patrick Hudelot, Gregor Seidel, Jennifer E. Pollack, Eric Jullo, +88 more
0citations -
Adversarial Robustness of Time-Series Classification for Crystal Collimator Alignment2026 arXiv (Cornell University) preprint Computer Science Adversarial Robustness in Machine Learning Open access
Xaver Fink, Borja Fernández Adiego, Daniele Mirarchi, Eloise Matheson, Álvaro García González, Gianmarco Ricci, +1 more
0citations