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Establishment of a tissue processing workflow and analysis of the influence of formalin fixation and paraffin embedding on the spectral bioinformation of salivary gland tumors2022 Laryngo-Rhino-Otologie article Biochemistry, Genetics and Molecular Biology Spectroscopy Techniques in Biomedical and Chemical Research Open access
Till Jasper Meyer, Elena Hartmann, Mona Stefanakis, Miriam C. Bassler, Marc Brecht, Rudolf Hagen, +2 more
0citations -
Histo-LOOP: A Novel Embedding Tool for Standardizing, Simplifying, and Advancing Histological Tissue Preparation2025 Journal of Histochemistry & Cytochemistry article Medicine Classical Anatomy and Histology Open access
Pakhwan Nilcham, Mamdouh Afify, Nicole Schaaps, Carolina Neu, Rahma Shahin, Andreas Prescher, +1 more
1citations -
Sample preparation of formalin-fixed paraffin-embedded tissue sections for MALDI-mass spectrometry imaging2020 Analytical and Bioanalytical Chemistry article Chemistry Mass Spectrometry Techniques and Applications Open access
Juliane Hermann, Heidi Noels, Wendy Theelen, Michaela Lellig, Setareh Orth-Alampour, Peter Boor, +2 more
73citations -
Performance of a RAD51-based functional HRD test on paraffin-embedded breast cancer tissue2023 Breast Cancer Research and Treatment article Biochemistry, Genetics and Molecular Biology BRCA gene mutations in cancer Open access
Lise M. van Wijk, Sylvia Vermeulen, Natalja T. ter Haar, Claire J.H. Kramer, Diantha Terlouw, Harry Vrieling, +2 more
10citations -
High‐Resolution Multiparameter DNA Flow Cytometry for Accurate Ploidy Assessment and the Detection and Sorting of Tumor and Stromal Subpopulations from Paraffin‐Embedded Tissues1citations
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Etablierung eines Gewebe-Aufarbeitungs-Workflows und Analyse des Einflusses der Formalinfixierung und Paraffineinbettung auf die spektrale Bioinformation von Speicheldrüsentumoren2022 Laryngo-Rhino-Otologie article Biochemistry, Genetics and Molecular Biology Spectroscopy Techniques in Biomedical and Chemical Research Open access
Till Jasper Meyer, Elena Hartmann, Mona Stefanakis, Miriam C. Bassler, Marc Brecht, Rudolf Hagen, +2 more
0citations -
Highly Repeatable Tissue Proteomics for Kidney Transplant Pathology: Technical and Biological Validation of Protein Analysis Using Liquid Chromatography-Tandem Mass Spectrometry/Mass Spectrometry (LC-MS/MS)2026 Laboratory Investigation article Chemistry Advanced Proteomics Techniques and Applications Open access
Rianne Hofstraat, Kristina Marx, Renata Blatnik, Nike Claessen, Hessel Peters Sengers, Sandrine Florquin, +2 more
3citations -
Multiomic profiling of medulloblastoma reveals subtype-specific targetable alterations at the proteome and N-glycan level2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Glioma Diagnosis and Treatment Open access
Hannah Voß, Shweta Godbole, Simon Schlumbohm, Yannis Schumann, Martin Mynarek, Stefan Rutkowski, +14 more
1citations -
Super-Resolution Microscopy in Clinical Specimens Using Conventional Widefield Microscopes2022 Journal of the American Society of Nephrology conference-abstract Biochemistry, Genetics and Molecular Biology Advanced Fluorescence Microscopy Techniques
Dominik Kylies, Marina Zimmermann, Fabian Haas, Malte B. Kuehl, Jan Czogalla, Oliver Kretz, +7 more
0citations -
The detection of isochromosome i(12p) in malignant germ cell tumours and tumours with somatic malignant transformation by the use of quantitative real‐time polymerase chain reaction
Alexander Fichtner, Annika Richter, Simon Filmar, Nadine Therese Gaisa, Stefan Schweyer, Henning Reis, +8 more
64citations -
High-Mannose N-Glycans as Malignant Progression Markers in Early-Stage Colorectal Cancer2022 Cancers article Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Fanny Boyaval, Hans Dalebout, René van Zeijl, Wenjun Wang, Arantza Fariña Sarasqueta, Guinevere S. M. Lageveen‐Kammeijer, +5 more
63citations -
Semi‐automated background removal limits data loss and normalizes imaging mass cytometry data2021 Cytometry Part A article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 1 patent
Marieke E. Ijsselsteijn, Antonios Somarakis, Boudewijn P. F. Lelieveldt, Thomas Höllt, Noel F.C.C. de Miranda
47citations -
Robust detection of translocations in lymphoma FFPE samples using targeted locus capture-based sequencing2021 Nature Communications article Biochemistry, Genetics and Molecular Biology Genomic variations and chromosomal abnormalities Open access
Amin Allahyar, Mark Pieterse, Joost F. Swennenhuis, G. Tjitske Los-de Vries, Roos J. Leguit, Ruud W. J. Meijers, +22 more
44citations -
Expansion-enhanced super-resolution radial fluctuations enable nanoscale molecular profiling of pathology specimens2023 Nature Nanotechnology article Biochemistry, Genetics and Molecular Biology Advanced Fluorescence Microscopy Techniques Open access
Dominik Kylies, Marina Zimmermann, Fabian Haas, Maria Schwerk, Malte B. Kuehl, Michael Brehler, +31 more
37citations -
Pre-existing inflammatory immune microenvironment predicts the clinical response of vulvar high-grade squamous intraepithelial lesions to therapeutic HPV16 vaccination2020 Journal for ImmunoTherapy of Cancer article Medicine Cervical Cancer and HPV Research Open access cited by 1 patent
Ziena Abdulrahman, Noel F.C.C. de Miranda, Edith M.G. van Esch, Peggy J. de Vos van Steenwijk, Hans W. Nijman, Marij J.P. Welters, +2 more
36citations -
BRCAness digitalMLPA profiling predicts benefit of intensified platinum-based chemotherapy in triple-negative and luminal-type breast cancer2020 Breast Cancer Research article Biochemistry, Genetics and Molecular Biology BRCA gene mutations in cancer Open access
Esther H. Lips, Anne Benard-Slagter, Mark Opdam, Caroline E. Scheerman, Jelle Wesseling, Frans B.L. Hogervorst, +3 more
34citations