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LncRNA-BERT: An RNA Language Model for Classifying Coding and Long Non-Coding RNA2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Luuk Romeijn, Davy Cats, Katherine Wolstencroft, Hailiang Mei
4citations -
Roles for the long non-coding RNA Pax6os1 / PAX6-AS1 in pancreatic beta cell identity and function2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic function and diabetes Open access
Livia López–Noriega, Rebecca Callingham, Aida Martínez-Sánchez, Sameena Nawaz, Grazia Pizza, Nejc Haberman, +13 more
6citations -
The long non-coding RNA MEG8 induces an endothelial barrier through regulation of microRNA-370 and -494 processing2022 Journal of Cell Science article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Veerle Kremer, Laura Stanicek, Eva van Ingen, Diewertje I. Bink, Sarah Hilderink, Anke J. Tijsen, +4 more
7citations -
The long non-coding RNA SAMMSON is essential for uveal melanoma cell survival2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Shanna Dewaele, Louis Delhaye, Boél De Paepe, Eric James de Bony, Jilke De Wilde, Katrien Vanderheyden, +13 more
0citations -
SMAD3 and p300 complex scaffolding by long non-coding RNA LIMD1-AS1 promotes TGF-β-induced breast cancer cell plasticity2025 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Chuannan Fan, Davy Cats, Olga Khorosjutina, Soniya Dhanjal, Bernhard Schmierer, Hailiang Mei, +2 more
4citations -
Aging-regulated anti-apoptotic long non-coding RNA Sarrah augments recovery from acute myocardial infarction2020 Nature Communications article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Dorotée Julia Trembinski, Diewertje I. Bink, Kosta Theodorou, Janina Sommer, Ariane Fischer, Anke S. van Bergen, +26 more
106citations -
The long non-coding RNA SAMMSON is essential for uveal melanoma cell survival2021 Oncogene article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Shanna Dewaele, Louis Delhaye, Boél De Paepe, Eric James de Bony, Jilke De Wilde, Katrien Vanderheyden, +18 more
30citations -
Long non-coding RNA expression profiling by RNA-sequencing in osteoarthritis cartilage2020 Osteoarthritis and Cartilage article Medicine Osteoarthritis Treatment and Mechanisms Open access
Marcella van Hoolwerff, P.M. Metselaar, M. Teurlings, H. Eka D. Suchiman, Rob G. H. H. Nelissen, Y.F. Ramos, +2 more
0citations -
Down-Regulation of Human Long Non-Coding RNA LINC01187 Is Associated with Nephropathies2021 SSRN Electronic Journal preprint Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Theodora Manolakou, Valeria Kaltezioti, Niki Prakoura, Panagiotis Kavvadas, Simone Reichelt‐Wurm, Hara Gakiopoulou, +10 more
0citations -
The long non-coding RNA CRNDE promotes osteosarcoma proliferation and migration by sponging miR-136-5p/MRP9 axis2022 Annals of Translational Medicine article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Xiaomin Ding, Yawen Zhang, Jinrong Liang, Junyi Yin, Naveed Akbar, Verónica Miguel, +1 more
5citations -
Correction to: The long non-coding RNA SAMMSON is essential for uveal melanoma cell survival2021 Oncogene erratum Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Shanna Dewaele, Louis Delhaye, Boél De Paepe, Eric James de Bony, Jilke De Wilde, Katrien Vanderheyden, +18 more
1citations -
Targeting long non-coding RNA MALAT1 preserves endothelial cell integrity and protects against kidney fibrosis2025 Molecular Therapy — Nucleic Acids article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Zhao Qiao, Loïs A.K. van der Pluijm, Morgane Gourvest, Atefeh Lafzi, Daniel Peled, Juliette A. de Klerk, +11 more
5citations -
A MOLECULAR MAP OF LONG NON-CODING RNA EXPRESSION, ISOFORM SWITCHING AND ALTERNATIVE SPLICING IN OSTEOARTHRITIS2022 Osteoarthritis and Cartilage article Medicine Osteoarthritis Treatment and Mechanisms Open access
Georgia Katsoula, Julia Steinberg, Margo Tuerlings, Rodrigo Coutinho de Almeida, Lorraine Southam, Diane Swift, +3 more
1citations -
MGcount: a total RNA-seq quantification tool to address multi-mapping and multi-overlapping alignments ambiguity in non-coding transcripts2022 BMC Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Andrea Hita, Gilles Brocart, Marc Rehmsmeier, Anna Alemany, Sol Schvartzman
17citations -
Cell Type-Specific and Diabetic Kidney Disease-Associated Expression of Long Non-Coding RNAs in Human Kidneys2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research
Juliette A. de Klerk, Roderick C. Slieker, Hao Wu, Yoshiharu Muto, Rudmer J. Postma, Leen M. ‘t Hart, +14 more
0citations -
Down‐regulation of human long non‐coding RNA LINC01187 is associated with nephropathies2023 Journal of Cellular and Molecular Medicine article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Theodora Manolakou, Valeria Kaltezioti, Niki Prakoura, Panagiotis Kavvadas, Simone Reichelt‐Wurm, Harikleia Gakiopoulou, +10 more
4citations -
Elucidating another level of epigenetic regulation in osteoarthritis by identifying functional cis -acting long non-coding RNAs and their targets in articular cartilage2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Osteoarthritis Treatment and Mechanisms Open access
Marcella van Hoolwerff, Paula I. Metselaar, Margo Tuerlings, H. Eka D. Suchiman, Nico Lakenberg, Y.F. Ramos, +6 more
0citations