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Cell-Surface RNA Forms Ternary Complex with RNA-Binding Proteins and Heparan Sulfate to Recruit Immune Receptors2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Zeshi Li, Bhagyashree S. Joshi, Ruud H. M. Wijdeven, Irene Santos‐Barriopedro, Milad Shademan, Eric Bos, +5 more
4citations -
AP-1 complex activation is a conserved signature of immune system aging and a potential regulator of inflammaging in human and mice2021 Research Square preprint Biochemistry, Genetics and Molecular Biology Genetics, Aging, and Longevity in Model Organisms Open access
Emin Onur Karakaslar, Muneer G. Hasham, Neerja Katiyar, Ahrim Youn, Siddhartha Sharma, Cheng‐Han Chung, +4 more
0citations -
Transcriptional activation of Jun and Fos members of the AP-1 complex is a conserved signature of immune aging that contributes to inflammaging2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetics, Aging, and Longevity in Model Organisms Open access
Emin Onur Karakaslar, Neerja Katiyar, Muneer G. Hasham, Ahrim Youn, Siddhartha M. Sharma, Cheng‐Han Chung, +4 more
6citations -
A powdery mildew core effector protein targets host endosome tethering complexes HOPS and CORVET2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Powdery Mildew Fungal Diseases Open access
Björn Sabelleck, Sohini Deb, Pietro D. Spanu, Hans Thordal‐Christensen, Ralph Panstruga
2citations -
QUAS-R: Glutamine (Q) Uptake Assay with Single cell Resolution reveals metabolic heterogeneity with immune populations2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Amino Acid Enzymes and Metabolism Open access
Leonard R. Pelgrom, Simon O’Shoughnessy, Sander van Kasteren, David K. Finlay, Linda V. Sinclair
5citations -
Perception of structurally distinct effectors by the integrated WRKY domain of a plant immune receptor2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access cited by 1 patent
Nitika Mukhi, Hannah Brown, Danylo Gorenkin, Pingtao Ding, Adam R. Bentham, Jonathan D. G. Jones, +1 more
5citations -
An immunocompetent human kidney on-a-chip model to study renal inflammation and immune-mediated injury2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Engineering 3D Printing in Biomedical Research Open access
Linda Gijzen, Marleen Bokkers, Richa Hanamsagar, Thomas Olivier, Todd P. Burton, Laura M. Tool, +5 more
1citations -
immuneML: an ecosystem for machine learning analysis of adaptive immune receptor repertoires2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology vaccines and immunoinformatics approaches Open access
Milena Pavlović, Lonneke Scheffer, Keshav Motwani, Chakravarthi Kanduri, Radmila Kompova, Nikolay Vazov, +37 more
17citations -
Systematic Evaluation of Nasal Immune Cell Sampling and Antigen-specific T cell Detection using Cryopreserved Nasal Swabs2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Wesley Huisman, Mark A. Power, Nina Le Bert, Elena Mitsi, Nile Verleur, Lisa A. King, +15 more
0citations -
Immunoglobulin G1 Fc glycosylation as an early hallmark of severe COVID-192021 medRxiv preprint Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Tamás Pongrácz, Jan Nouta, Wenjun Wang, Krista E. van Meijgaarden, Federica Linty, Gestur Vidarsson, +7 more
8citations -
Federated single-cell QTL meta-analysis reveals novel disease mechanisms2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Dan Kaptijn, Lieke Michielsen, Drew R. Neavin, Aida Ripoll-Cladellas, José Alquicira-Hernández, Maryna Korshevniuk, +52 more
1citations -
Multimodal evidence for impaired glymphatic brain clearance as a mediator of “inflammaging” in schizophrenia – integrating insights from in vivo neuroimaging, omics, and post-mortem single nucleus-RNA-Seq data2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Cerebrospinal fluid and hydrocephalus Open access
Xiaolin Tan, Malte Simon, Daniel Rosebrock, Mariia Firuleva, Doris Gruber-Schoffnegger, Marisa Fuerst, +7 more
0citations -
Genetic susceptibility to neurodevelopmental conditions associates with neonatal DNA methylation patterns in the general population: an individual participant data meta-analysis2024 medRxiv preprint Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access
Isabel K. Schuurmans, Dinka Smajlagić, V. Baltramonaityte, Anni Malmberg, Alexander Neumann, Nicole Creasey, +12 more
1citations -
TIGIT drives the immunosuppressive environment by downregulation of metalloproteinases MMP2 and MMP14 in perihilar cholangiocarcinoma2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cholangiocarcinoma and Gallbladder Cancer Studies Open access
Lara Rosaline Heij, Konrad Reichel, Willem de Koning, Jan Bednarsch, Xiuxiang Tan, Julia Campello Deierl, +13 more
0citations -
Nerve fibers in the Tumor Microenvironment are co-localized with Tertiary Lymphoid Structures2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic and Hepatic Oncology Research Open access
Lara Rosaline Heij, Xiuxiang Tan, Jakob Nikolas Kather, Jan Niehues, Shivan Sivakumar, Nicole Maria Heussen, +12 more
0citations -
Multimodal single-cell profiling reveals cancer crosstalk between macrophages and stromal cells in poor prognostic cholangiocarcinoma patients2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cholangiocarcinoma and Gallbladder Cancer Studies Open access
Lara Rosaline Heij, Sikander Hayat, Konrad Reichel, Sidrah Maryam, Colm J. O’Rourke, Xiuxiang Tan, +22 more
0citations -
The NLRP1 inflammasome emerges as a promising therapeutic target and prognostic biomarker across multiple cancer types: A comprehensive pan-cancer analysis2024 Research Square preprint Biochemistry, Genetics and Molecular Biology Inflammasome and immune disorders Open access
Leila Habibipour, Mahboubeh Sadeghi, Alireza Raghibi, Amirhossein Mohajeri Khorasani, Pegah Mousavi, Nima Sanadgol
0citations -
The human and mouse dendritic cell receptor DCIR binds to LRP1 N-glycans containing terminal galactoses, including the α-Gal antigen2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Benjamin B. A. Raymond, Tamara Sneperger, Stella Rousset, Nelly Gilles, Aurélie Bally, Alexandre Stella, +11 more
0citations -
CRISPR activation screening identifies VGLL3 and GATA2 as transcriptional regulators of PD-L12021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Ruud H. M. Wijdeven, Birol Cabukusta, Xueer Qiu, Daniel Borràs, Yun Liang, Jacques Neefjes
0citations -
Functional requirement of the Arabidopsis importin-α nuclear transport receptor family in autoimmunity mediated by the NLR protein SNC12020 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Daniel Lüdke, Charlotte Roth, Sieglinde A. Kamrad, Jana Messerschmidt, Denise Hartken, Jonas Appel, +7 more
0citations