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Integration of mass cytometry and mass spectrometry imaging for spatially resolved single-cell metabolic profiling2024 Nature Methods article Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Joana B. Nunes, Marieke E. Ijsselsteijn, Tamim Abdelaal, Rick Ursem, Manon van der Ploeg, Martin A. Giera, +4 more
92citations -
An imaging mass cytometry immunophenotyping panel for non-human primate tissues2022 Frontiers in Immunology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Paula Niewold, Marieke E. Ijsselsteijn, Frank A. W. Verreck, Tom H. M. Ottenhoff, Simone A. Joosten
7citations -
Semi‐automated background removal limits data loss and normalizes imaging mass cytometry data2021 Cytometry Part A article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 1 patent
Marieke E. Ijsselsteijn, Antonios Somarakis, Boudewijn P. F. Lelieveldt, Thomas Höllt, Noel F.C.C. de Miranda
47citations -
Visualizing the codevelopment of structural and immune cells in the human fetal lung using imaging mass cytometry2025 American Journal of Physiology-Lung Cellular and Molecular Physiology article Medicine Neonatal Respiratory Health Research Open access
Jia Li, Susana M. Chuva de Sousa Lopes, Vincent van Unen, Pieter Sicco Hiemstra, Jan N Stolk, Frits Koning, +1 more
0citations -
Imaging mass cytometry reveals the prominent role of myeloid cells at the maternal-fetal interface2022 iScience article Immunology and Microbiology Reproductive System and Pregnancy Open access cited by 1 patent
Juliette Krop, Anita van der Zwan, Marieke E. Ijsselsteijn, Hanneke Kapsenberg, Sietse J. Luk, Sanne H. Hendriks, +13 more
51citations -
A 34-Marker Panel for Imaging Mass Cytometric Analysis of Human Snap-Frozen Tissue2020 Frontiers in Immunology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Nannan Guo, Vincent van Unen, Marieke E. Ijsselsteijn, Laura F. Ouboter, Andrea E. van der Meulen‐de Jong, Susana M. Chuva de Sousa Lopes, +3 more
45citations -
High-Dimensional Mass Cytometry Reveals Emphysema-associated Changes in the Pulmonary Immune System2024 American Journal of Respiratory and Critical Care Medicine article Medicine Chronic Obstructive Pulmonary Disease (COPD) Research Open access
Jia Li, Na Li, Tamim Abdelaal, Nannan Guo, Marieke E. IJsselstein, Vincent van Unen, +8 more
14citations -
Identification of a Disease-Associated Network of Intestinal Immune Cells in Treatment-Naive Inflammatory Bowel Disease2022 Frontiers in Immunology article Biochemistry, Genetics and Molecular Biology Inflammatory Bowel Disease Open access
Vincent van Unen, Laura F. Ouboter, Na Li, Mette Schreurs, Tamim Abdelaal, Yvonne Kooy–Winkelaar, +13 more
33citations -
Unraveling the Complexity of the Cancer Microenvironment With Multidimensional Genomic and Cytometric Technologies2020 Frontiers in Oncology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 2 patents
Natasja L. De Vries, Ahmed Essam Mahfouz, Frits Koning, Noel F.C.C. de Miranda
60citations -
Immune subset-committed proliferating cells populate the human foetal intestine throughout the second trimester of gestation2023 Nature Communications article Immunology and Microbiology IL-33, ST2, and ILC Pathways Open access
Nannan Guo, Na Li, Jia Li, Qinyue Jiang, Mette Schreurs, Vincent van Unen, +8 more
18citations -
Protocol for multispectral imaging on cryosections to map myeloid cell heterogeneity in its spatial context2023 STAR Protocols article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Elias B Wieland, Laura JAP Kempen, Chang Wei Lu, Marjo M. P. C. Donners, Erik A.L. Biessen, Pieter Goossens
2citations -
Explainable multiview framework for dissecting spatial relationships from highly multiplexed data2022 Genome biology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Jovan Tanevski, Ricardo O. Ramirez Flores, Attila Gábor, Denis Schapiro, Julio Sáez-Rodríguez
291citations -
Impact of Fusobacterium nucleatum on immune cell interactions and gene expression in colorectal cancer: a retrospective cohort study2025 Frontiers in Immunology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Ronald Heregger, Florian Huemer, Richard Greil, Marina Cañadas-Ortega, Gernot Posselt, Marieke E. Ijsselsteijn, +8 more
3citations -
IDO+ Endothelial Cells in Glomeruli of Kidney Transplantation Patients With Glomerulitis2024 Transplantation Direct article Medicine Renal Transplantation Outcomes and Treatments Open access
Sanne H. Hendriks, Sebastiaan Heidt, Juliette Krop, Marieke E. Ijsselsteijn, Jeroen Eggermont, Jesper Kers, +3 more
1citations -
Cellular interaction of mycosis fungoides tumor cells changes from cytotoxic CD8+ T cells in plaques to B cells in tumors2026 Frontiers in Immunology article Medicine Cutaneous lymphoproliferative disorders research Open access
Veerle A. Merkus, Marieke E. Ijsselsteijn, Marie S.N. Chevalier Florquin, Sanne de Haan, Vincent van Unen, Cornelis P. Tensen, +6 more
0citations