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Lifestyle Risk Score for aggregating multiple lifestyle factors: Handling missingness of individual lifestyle components in meta-analysis of gene-by-lifestyle interactions2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Hanfei Xu, Karen Schwander, Wenyi Wang, R. J. Waken, Eric Boerwinkle, L. Adrienne Cupples, +11 more
0citations -
PyLabRobot: An Open-Source, Hardware Agnostic Interface for Liquid-Handling Robots and Accessories2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Decision Sciences Scientific Computing and Data Management Open access
Rick P. Wierenga, Stefan M. Golas, Wilson Ho, Connor W. Coley, Kevin M. Esvelt
0citations -
Image-Based Meta- and Mega-Analysis (IBMMA): A Unified Framework for Large-Scale, Multi-Site, Neuroimaging Data Analysis2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Functional Brain Connectivity Studies Open access
Rajendra A. Morey, Ahmed Tafsirul Hussain, Courtney E. Russell, Benjamin Suarez‐Jimenez, Elena Pozzi, Hadis Jameei, +87 more
1citations -
SwarmMAP: Swarm Learning for Decentralized Cell Type Annotation in Single Cell Sequencing Data2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Oliver Lester Saldanha, Vivien Goepp, Hyojin Kim, Jie Ping Zhu, Rafael Kramann, Sikander Hayat, +1 more
1citations -
FLAG-X: Hybrid machine learning workflows for automated gating of clinical flow cytometry data2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Paul Martini, Marziyeh Mohammadi, Michael Christoph Thrun, David B. Blumenthal, Stefan W. Krause
0citations -
RGT: a toolbox for the integrative analysis of high throughput regulatory genomics data2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Zhijian Li, Chao‐Chung Kuo, Fabio Ticconi, Mina Shaigan, Eduardo Gade Gusmao, Manuel Allhoff, +3 more
2citations -
fluxTrAM: Integration of tracer-based metabolomics data into atomically resolved genome-scale metabolic networks for metabolic flux analysis2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Luojiao Huang, German Preciat, Jesús Alarcón-Gil, Edinson Lucumi Moreno, Agnieszka B. Wegrzyn, Ines Thiele, +4 more
1citations -
Euclid Quick Data Release (Q1). Searching for giant gravitational arcs in galaxy clusters with mask region-based convolutional neural networks2025 arXiv (Cornell University) preprint Physics and Astronomy Galaxies: Formation, Evolution, Phenomena Open access
Euclid Collaboration, L. Bazzanini, G. Angora, P. Bergamini, Massimo Meneghetti, Rosati P, +94 more
1citations -
PAV-spotter: using signal cross-correlations to identify Presence/Absence Variation in target capture data2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Manon Chantal de Visser, Chris van der Ploeg, Milena Cvijanović, Tijana Z. Vučić, Anagnostis Theodoropoulos, Ben Wielstra
4citations -
Keep looking at the negative side: improved detection of drug-induced liver injury with non-hepatotoxicant data oversampling2025 ChemRxiv preprint Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Olivier J. M. Béquignon, Steven Wink, Steven W. Hiemstra, J. E. Fokkelman-Klip, Wouter den Hollander, Giulia Callegaro, +2 more
0citations -
Keep looking at the negative side: improved detection of drug-induced liver injury with non-hepatotoxicant data oversampling2025 ChemRxiv preprint Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Olivier J. M. Béquignon, Steven Wink, Steven W. Hiemstra, J. E. Fokkelman-Klip, Wouter den Hollander, Giulia Callegaro, +2 more
0citations -
Applying Process Mining on Scientific Workflows: a Case Study on High Performance Computing Data2023 arXiv (Cornell University) preprint Business, Management and Accounting Business Process Modeling and Analysis Open access
Zahra Sadeghibogar, Alessandro Berti, Marco Pegoraro, Wil M. P. van der Aalst
1citations -
Efficiency measurements of GEM GE1/1 chambers in the upgraded CMS Endcap Muon System using 2023 collision data at $\sqrt{s}=13.6$ TeV2026 arXiv (Cornell University) preprint Physics and Astronomy Particle Detector Development and Performance Open access
M. Abbas, S. Abbott, M. Abbrescia, H. Abdalla, A. Abdelalim, S. AbuZeid, +93 more
0citations