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Tropical invertebrate community assembly processes are robust to a gradient of land use intensity2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Ecology and Vegetation Dynamics Studies Open access
Natasha R. Granville, Maxwell V. L. Barclay, Michael J. W. Boyle, Arthur Y. C. Chung, Tom M. Fayle, Huai En Hah, +10 more
1citations -
Ecologically inspired assembly of a Bacillales synthetic community for lignin degradation2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Engineering Lignin and Wood Chemistry Open access
Qing Zhou, Xingchen Xin, Chao Du, Youri Meelkop, Sebastiaan N. J. Laan, Joost J. Willemse, +6 more
0citations -
Impaired community assembly after depletion of key rhizosphere microorganisms compromises plant health2022 Research Square preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Yanyan Zhou, Zhen Yang, Jinguang Liu, Xingxiang Wang, Chuan‐Chao Dai, Víctor J. Carrión, +1 more
0citations -
Unraveling Amazon tree community assembly using Maximum Information Entropy : a quantitative analysis of tropical forest ecology2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Ecology and Vegetation Dynamics Studies Open access
Edwin Pos, Luiz de Souza Coêlho, Diógenes de Andrade Lima Filho, Rafael P. Salomão, Iêda Leão do Amaral, Francisca Dionízia de Almeida Matos, +94 more
0citations -
Large-scale assembly of trait data from community science field images reveals inter- and intraspecific climate–phenology drivers of dragonfly body melanism2026 Research Square preprint Agricultural and Biological Sciences Animal Behavior and Reproduction Open access
Jacob H. Idec, Seth Bybee, Jessica L. Ware, John Abbott, Vincent J. Kalkman, Robert Guralnick
0citations -
Metacommunity theory and metabarcoding reveal the environmental, spatial, and biotic drivers of meiofaunal communities in sandy beaches2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Earth and Planetary Sciences Marine Biology and Ecology Research Open access
Jan‐Niklas Macher, Maximilian Pichler, Simon Creer, Alejandro Martínez, Diego Fontaneto, Willem Renema
5citations -
Stabilising selection and ecological trade-offs underpin coexistence in a tropical flora2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access
Matti A. Niissalo, Jun Ying Lim, Jia Jun Ngiam, Sitaram Rajaraman, Le Min Choo, Joan Jing Yi Jong, +48 more
1citations -
Disruption without diversity loss: how spreading thermotolerant Pilidium lythri infection perturbs plant-soil microbiome stability2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Dominika Siegieda, Jacek Panek, S. Emilia Hannula, Magdalena Frąc
0citations -
Benchmarking of shotgun sequencing depth highlights limitations of strain-level analysis and shallow metagenomics2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Nicole Simone Treichel, Joana Séneca, Petra Pjevac, David Berry, John Penders
5citations -
Invertebrate species distributions in urban ecosystems are driven by habitat availability, not by anthropogenic drivers2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Ecology and Vegetation Dynamics Studies Open access
Joeri Morpurgo, Roy P. Remme, Quinten D. Mudde, Emilie A. Didaskalou, Kornelia J. Serwatowska, Krijn Baptist Trimbos, +2 more
2citations -
Surfactin facilitates the establishment of Bacillus subtilis in synthetic communities2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Microbial Natural Products and Biosynthesis Open access
Carlos N. Lozano-Andrade, Caja Dinesen, Mario Wibowo, Nil Arenos Bach, Viktor Hesselberg-Thomsen, Scott A. Jarmusch, +2 more
1citations -
How does negative plant-soil feedback across life stages affect the spatial patterning of trees?2023 Research Square preprint Medicine Mathematical and Theoretical Epidemiology and Ecology Models Open access
Annalisa Iuorio, Maarten Boudewijn Eppinga, Mara Baudena, Frits Veerman, Max Rietkerk, Francesco Giannino
0citations -
SynCom101: A web-based platform for the standardized design of functionally tailored synthetic microbial communities2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health
Jiayi Jing, Siemen Rockx, Aster Liu, Chrats Melkonian, Jos M. Raaijmakers, Paolina Garbeva, +1 more
0citations -
Comparative sampling of Neotropical and Paleotropical elevation gradients reveals the role of climate in shaping the functional and taxonomic composition of soil-borne fungal communities in tropical forests2020 preprint Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access
József Geml, Elizabeth C. Arnold, Tatiana Semenova Nelsen, Eduardo R. Nouhra, Luís Neves Morgado, Oriol Grau, +3 more
1citations -
Strain-specific higher-order interactions break phylogenetic conservatism in microbial communities2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Microbial Community Ecology and Physiology Open access
Emmanuel Cordero-Martínez, Marisol Navarro-Miranda, Obed Ramírez‐Sánchez, Edder D. Bustos‐Díaz, Victor M. Higareda‐Alvear, Gabriel Moreno‐Hagelsieb, +3 more
0citations -
Multi-compartment impact of micropollutants and particularly antibiotics on bacterial communities using environmental DNA at river basin-level2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Pharmaceutical and Antibiotic Environmental Impacts Open access
Pedro A. Inostroza, Gerdhard L Jessen, Feilong Li, Xiaowei Zhang, Werner Brack, Thomas Backhaus
0citations -
Designing synthetic communities with organism-free modular computational models2022 ChemRxiv preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Anna Matuszyńska, Oliver Ebenhöh, Matias Daniel Zurbriggen, Daniel C. Ducat, Ilka Maria IM Axmann
0citations -
Long-term hunter-gatherer continuity in the Rhine-Meuse region was disrupted by local formation of expansive Bell Beaker groups2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Forensic and Genetic Research Open access
Íñigo Olalde, Eveline Altena, Quentin P. J. Bourgeois, H. Fokkens, Luc W. S. W. Amkreutz, Marie‐France Deguilloux, +36 more
1citations -
Beyond the Highlands: Climate Drives Evolutionary Connections Between Ancient Neotropical Mountains and Lowland Biomes2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant Diversity and Evolution Open access
Yago Barros‐Souza, Monique Maianne, Rafael Fernandes Barduzzi, L. P. BORGES
0citations -
DAISIEprep: an R package for the extraction and formatting of data for the island biogeography model DAISIE2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Ecology and Vegetation Dynamics Studies Open access
Joshua W. Lambert, Lizzie Roeble, Théo Pannetier, Rampal S. Etienne, Luís Valente
0citations -
A functionally validated TCR-pMHC database for TCR specificity model development2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology vaccines and immunoinformatics approaches Open access
Marius Messemaker, Bjørn P. Y. Kwee, Živa Moravec, Daniel Álvarez Salmoral, Jos H. M. Urbanus, Sam de Paauw, +12 more
32citations