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CDE-Mapper: Using Retrieval-Augmented Language Models for Linking Clinical Data Elements to Controlled Vocabularies2025 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Komal Gilani, Marlo Verket, Michel J. Dumontier, Hans‐Peter Brunner‐La Rocca, Visara Urovi
0citations -
Generating virtual patient data for in silico clinical trials of medical devices during extracorporeal membrane oxygenation treatment2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Machine Learning in Healthcare Open access
Micha Landoll, Filippo Follegot, Stephan Eric Straßmann, Ulrich Steinseifer, Christian Karagiannidis, Michael Neidlin
0citations -
The GA4GH Phenopacket schema: A computable representation of clinical data for precision medicine2021 medRxiv preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Julius O.B. Jacobsen, Michael Baudis, Gareth S Baynam, J. Beckmann, Sergi Beltrán, Tiffany J. Callahan, +41 more
14citations -
FLAG-X: Hybrid machine learning workflows for automated gating of clinical flow cytometry data2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Paul Martini, Marziyeh Mohammadi, Michael Christoph Thrun, David B. Blumenthal, Stefan W. Krause
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A system for independent evaluation of clinical prediction models while preserving intellectual property and data privacy2026 Zenodo (CERN European Organization for Nuclear Research) preprint Mathematics Statistical Methods in Epidemiology Open access
Joie Ensor, Ben Van Calster, Lasai Barreñada, Laure Wynants, Benjamin I. Perry
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Multimodal Data Integration Advances Longitudinal Prediction of the Naturalistic Course of Depression and Reveals a Multimodal Signature of Disease Chronicity2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Treatment of Major Depression Open access
Philippe C. Habets, Rajat Mani Thomas, Yuri Milaneschi, Rick Jansen, René Pool, Wouter J. Peyrot, +4 more
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Assessment of Clinical Information Quality in Digital Health Technologies: An International eDelphi Study2022 SSRN Electronic Journal preprint Health Professions Electronic Health Records Systems Open access
Kayode Philip Fadahunsi, Petra A. Wark, Nikolaos Mastellos, Ana Luísa Neves, Joseph E. Gallagher, Azeem Majeed, +21 more
0citations -
Metabolic predictors of phenotypic traits can replace and complement measured clinical variables in transcriptome-wide association studies2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Anna Niehues, Daniele Bizzarri, Marcel J. T. Reinders, P. Eline Slagboom, Alain J. van Gool, Erik B. van den Akker, +1 more
0citations -
Biomedical Large Languages Models Seem not to be Superior to Generalist Models on Unseen Medical Data2024 arXiv (Cornell University) preprint Medicine Artificial Intelligence in Healthcare and Education Open access
Felix J. Dorfner, Amin Dada, Felix Busch, Marcus R. Makowski, Daniel Truhn, Jens Kleesiek, +4 more
8citations