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bio.tools: an expanded web service for research software in the life sciences2026 Nucleic Acids Research article Decision Sciences Scientific Computing and Data Management Open access
Ana Mendes, Hans Ienasescu, Christian A T Andersen, Erin Calhoun, Piotr Jaroslaw Chmura, Kathleen Collier, +18 more
0citations -
FAIR in practice: minimum metadata schema for bioinformatics analytics by machines2026 Journal of Biomedical Semantics article Computer Science Research Data Management Practices Open access
Daphne Wijnbergen, Núria Queralt-Rosiñach, Valérie Barbié, Emma Verkinderen, Nirupama Benis, Annika Jacobsen, +4 more
0citations -
iFeatureOmega: an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets2022 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Zhen Chen, Xuhan Liu, Pei Zhao, Chen Li, Yanan Wang, Fuyi Li, +7 more
102citations -
13CFLUX - third-generation high-performance engine for isotopically (non)stationary 13C metabolic flux analysis2025 Bioinformatics article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Anton Stratmann, Martin Beyß, Johann F. Jadebeck, Wolfgang Wiechert, Katharina Nöh
5citations -
Community-driven advances in computational mass spectrometry: The perspective of EuBIC-MS members2026 Journal of Proteomics article Chemistry Advanced Proteomics Techniques and Applications Open access
Dirk Winkelhardt, Julia Patricia Schessner, Sven Berres, Alireza Nameni, Armin Soleymaniniya, Ayla Schröder, +17 more
0citations -
An educational guide for nanopore sequencing in the classroom2020 PLoS Computational Biology article Biochemistry, Genetics and Molecular Biology Genetics, Bioinformatics, and Biomedical Research Open access
Alex Salazar, Franklin L. Nóbrega, Christine Anyansi, Cristian Aparicio-Maldonado, Ana Rita Costa, Anna C. Haagsma, +6 more
32citations -
BeadNet: deep learning-based bead detection and counting in low-resolution microscopy images2020 Bioinformatics article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Tim Scherr, Karolin Streule, Andreas Bartschat, Moritz Böhland, Johannes Stegmaier, Markus Reischl, +2 more
5citations -
CellSium: versatile cell simulator for microcolony ground truth generation2022 Bioinformatics Advances article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Christian Carsten Sachs, Karina Ruzaeva, Johannes Seiffarth, Wolfgang Wiechert, Benjamin Berkels, Katharina Nöh
3citations -
The Association of Biomolecular Resource Facilities Proteome Informatics Research Group Study on Metaproteomics (iPRG-2020)2023 Journal of Biomolecular Techniques JBT article Chemistry Advanced Proteomics Techniques and Applications Open access
Pratik Dilip Jagtap, Michael R. Hoopmann, Benjamin A. Neely, Antony Harvey, Lukas Käll, Yasset Pérez‐Riverol, +4 more
12citations