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A configurable software platform for creating, reviewing and adjudicating annotation of unstructured text.2022 International Journal for Population Data Science article Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Richard J Beare, Tanya Ravipati, Elizabeth Le, Taya Annabelle Collyer, Velandai K. Srikanth, Nadine E. Andrew
0citations -
Cooperative AI training for cardiothoracic segmentation in computed tomography: An iterative multi-center annotation approach2024 European Journal of Radiology article Computer Science Medical Image Segmentation Techniques Open access
Bianca C Lassen-Schmidt, Bettina Baeßler, Matthias Gutberlet, Josephine Berger, Jan Michael Brendel, Andreas Michael Bucher, +17 more
4citations -
Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna2024 Molecular Ecology Resources article Environmental Science Environmental DNA in Biodiversity Studies Open access
Jan‐Niklas Macher, Alejandro Martínez, Sude Çakir, Pierre‐Etienne Cholley, Eleni Christoforou, Marco Curini Galletti, +11 more
22citations -
Barcode-free hit discovery from massive libraries enabled by automated small molecule structure annotation2025 Nature Communications article Biochemistry, Genetics and Molecular Biology Chemical Synthesis and Analysis Open access
Edith van der Nol, Nicola Haupt, Qingsong Gao, Benthe A. M. Smit, Martin Andre Hoffmann, Martin S. Engler, +9 more
5citations -
Deep learning segmentation model for quantification of infarct size in pigs with myocardial ischemia/reperfusion2024 Basic Research in Cardiology article Computer Science Medical Image Segmentation Techniques Open access
Felix Braczko, Andreas Skyschally, Helmut Raphael Lieder, Jakob Nikolas Kather, Petra Kleinbongard, Gerd Heusch
2citations -
Single-cell reference mapping to construct and extend cell-type hierarchies2023 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Lieke Michielsen, Mohammad Lotfollahi, Daniel C. Strobl, Lisa Sikkema, Marcel J. T. Reinders, Fabian Joachim Theis, +1 more
43citations -
Superpixel segmentations for thin sections: Evaluation of methods to enable the generation of machine learning training data sets2022 Computers & Geosciences article Computer Science Advanced Neural Network Applications Open access
Jiaxin Yu, Florian Wellmann, Simon Virgo, Marven von Domarus, Mingze Jiang, Joyce Schmatz, +1 more
30citations -
scDecorr: feature decorrelation based representation learning enables self-supervised alignment of multiple single-cell experiments2026 Scientific Reports article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ritabrata Sanyal, Yang Xu, Hyojin Kim, Rafael Kramann, Sikander Hayat
0citations -
DiSCount: computer vision for automated quantification of Striga seed germination2020 Plant Methods article Agricultural and Biological Sciences Plant Parasitism and Resistance Open access
Raul Masteling, Lodewijk Voorhoeve, Joris M.M. IJsselmuiden, Francisco Dini‐Andreote, Wietse de Boer, Jos M. Raaijmakers
20citations -
The Cell Ontology in the age of single-cell omics2026 eScholarship (California Digital Library) article Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Shawn Zheng Kai Tan, Aleix Puig-Barbe, Damien Goutte-Gattat, Caroline Eastwood, Brian Aevermann, Alida Avola, +29 more
5citations -
Validation of an automated AI-based micro-CT organ segmentation workflow against expert annotations and its impact on fluorescence quantification2026 European Radiology Experimental article Computer Science Medical Image Segmentation Techniques Open access
Elena Rama, Sihe Yu, Sarah Schraven, Zachary Gurberg, Ekaterina Savina, J Liu, +3 more
0citations -
Automated detection of satellite trails in ground-based observations using U-Net and Hough transform2024 Astronomy and Astrophysics article Physics and Astronomy Astronomy and Astrophysical Research Open access
Fiorenzo Stoppa, P. Groot, Remko Stuik, Paul M. Vreeswijk, S. Bloemen, D. L. A. Pieterse, +1 more
14citations -
Deep learning characterization of stress-state-dependent anisotropic ductile damage2026 International Journal of Mechanical Sciences article Engineering Metal Forming Simulation Techniques Open access
Zhichao Wei, Yijia Mo, Shuwei Zhou, Steffen Gerke, Sebastian Münstermann, Michael Brünig
7citations -
Towards automatic quantification of operating table interaction in operating rooms2025 International Journal of Computer Assisted Radiology and Surgery article Medicine Surgical Simulation and Training Open access
Rick M. Bütler, Anne M Schouten, Anne Catherine van der Eijk, Maarten van der Elst, Benno H. W. Hendriks, John J. van den Dobbelsteen
2citations