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Papers matching “Python performance” 88

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pyFOOMB: Python framework for object oriented modeling of bioprocesses
2021 Engineering in Life Sciences article Computer Science Modeling and Simulation Systems Open access

Johannes Hemmerich, Niklas Tenhaef, Wolfgang Wiechert, Stephan Noack

30

citations
13CFLUX - third-generation high-performance engine for isotopically (non)stationary 13C metabolic flux analysis
2025 Bioinformatics article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access

Anton Stratmann, Martin Beyß, Johann F. Jadebeck, Wolfgang Wiechert, Katharina Nöh

5

citations
Open-source framework for automated generation of building energy performance simulation models and beyond from BIM Data
2025 Automation in Construction article Engineering BIM and Construction Integration Open access

David Jansen, Veronika Richter, Laura Maier, Jérôme Frisch, Christoph van Treeck, Dirk Müller

13

citations
The ecological impact of high-performance computing in astrophysics
2020 Nature Astronomy article Engineering Green IT and Sustainability Open access

Simon Portegies Zwart

83

citations
Exploring Parameter and Hyper-Parameter Spaces of Neuroscience Models on High Performance Computers With Learning to Learn
2022 Frontiers in Computational Neuroscience article Neuroscience Neural dynamics and brain function Open access

Alper Yegenoglu, Anand Subramoney, Thorsten Hater, Cristian Jimenez-Romero, Wouter Klijn, Aarón Pérez Martín, +4 more

9

citations
Systematic analysis of non-intrusive polynomial chaos expansion to determine rotary blood pump performance over the entire operating range
2023 Computers in Biology and Medicine article Engineering Mechanical Circulatory Support Devices Open access

Christopher Blum, Ulrich Steinseifer, Michael Neidlin

5

citations
kMap.py: A Python program for simulation and data analysis in photoemission tomography
2021 Computer Physics Communications article Materials Science Electron and X-Ray Spectroscopy Techniques Open access

Dominik Brandstetter, Xiaosheng Yang, Daniel Lüftner, Frank Stefan Tautz, Peter Puschnig

1

citations
Pigreads: The Python-integrated GPU-enabled reaction-diffusion solver using OpenCL for cardiac electrophysiology and other applications
2026 Computer Physics Communications article Computer Science Parallel Computing and Optimization Techniques Open access

Desmond Kabus, Hans Dierckx, Tim De Coster

1

citations
hopsy — a methods marketplace for convex polytope sampling in Python
2024 Bioinformatics article Mathematics Markov Chains and Monte Carlo Methods Open access

Richard Dominik Paul, Johann F. Jadebeck, Anton Stratmann, Wolfgang Wiechert, Katharina Nöh

8

citations
Balsa: A Fast C++ Random Forest Classifier with Command-line and Python Interface
2026 The Journal of Open Source Software article Computer Science Machine Learning and Data Classification Open access

Tobias Borsdorff, Denis de Leeuw Duarte, Joris van Zwieten, S. Mandal, Jochen Landgraf

0

citations
MF2: A Collection of Multi-Fidelity Benchmark Functions in Python
2020 The Journal of Open Source Software article Computer Science Metaheuristic Optimization Algorithms Research Open access

Sander van Rijn, Sebastian Schmitt

10

citations
A flexible Python-based touchscreen chamber for operant conditioning reveals improved visual perception of cardinal orientations in mice
2022 Frontiers in Cellular Neuroscience article Neuroscience Visual perception and processing mechanisms Open access

Christopher Wiesbrock, Simon Musall, Björn M. Kampa

6

citations
A modular Python framework for rapid development of advanced control algorithms for energy systems
2025 Applied Energy article Engineering Building Energy and Comfort Optimization Open access

Steffen Eser, Thomas Storek, Fabian Wüllhorst, Stefan Dähling, Jan Gall, Phillip Stoffel, +1 more

13

citations
BayesicFitting, a PYTHON toolbox for Bayesian fitting and evidence calculation.
2021 Astronomy and Computing article Mathematics Markov Chains and Monte Carlo Methods Open access

D. J. M. Kester, Michael Mueller

10

citations
Fibre phantom generation using FibreSimulator : an open-source Python tool
2026 Journal of Synchrotron Radiation article Physics and Astronomy Advanced X-ray Imaging Techniques Open access

Mary Chris Roperos Go, Daniël M. Pelt, Anirudh Kohli, Philip J. Withers, Kees Joost Batenburg

1

citations
PS-AAS: Portfolio Selection for Automated Algorithm Selection in Black-Box Optimization - Reproducibility Repository
2023 Zenodo (CERN European Organization for Nuclear Research) article Computer Science Metaheuristic Optimization Algorithms Research Open access

Ana Kostovska, Gjorgjina Cenikj, Diederick Vermetten, Anja Jankovič, Ana Nikolikj, Urban Škvorc, +3 more

0

citations
gpuZoo: Cost-effective estimation of gene regulatory networks using the Graphics Processing Unit
2022 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access

Marouen Ben Guebila, Daniel C. Morgan, Kimberly Glass, Marieke L. Kuijjer, Dawn Lisa DeMeo, John Quackenbush

8

citations
Network Design Tool for DC Solutions
2025 Zenodo (CERN European Organization for Nuclear Research) article Engineering HVDC Systems and Fault Protection Open access

E. El Sayegh, A. Addala, Rémi Lembeye, Pedro B. C. Costa, Manuel Pedro Neto, Motaz M. Ayiad, +3 more

0

citations
Network Design Tool for DC Solutions
2025 Zenodo (CERN European Organization for Nuclear Research) article Engineering Optimal Power Flow Distribution Open access

E. El Sayegh, A. Addala, Rémi Lembeye, Pedro B. C. Costa, Manuel Pedro Neto, Motaz M. Ayiad, +3 more

0

citations
Predicting Overall Survival of NSCLC Patients with Clinical, Radiomics and Deep Learning Features
2026 Journal of Imaging Informatics in Medicine article Medicine Radiomics and Machine Learning in Medical Imaging Open access

Hemalatha Kanakarajan, Jikai Zhou, Aiara Lobo Gomes, Petros Kalendralis, Wenjie Liang, Fariba Tohidinezhad, +3 more

2

citations
The Linear Algebra Mapping Problem. Current State of Linear Algebra Languages and Libraries
2022 ACM Transactions on Mathematical Software article Computer Science Parallel Computing and Optimization Techniques Open access

Christos Psarras, Henrik Barthels, Paolo Bientinesi

15

citations
EXCELLERATP2 D2.9 Updated Report on the m-AIA Application Use Case
2026 Zenodo (CERN European Organization for Nuclear Research) article Engineering Aerodynamics and Acoustics in Jet Flows Open access

Ansgar Niemöller, Matthias H. Meinke, Arno Feiden

0

citations
EXCELLERATP2 D2.9 Updated Report on the m-AIA Application Use Case
2026 Zenodo (CERN European Organization for Nuclear Research) article Engineering Aerodynamics and Acoustics in Jet Flows Open access

Ansgar Niemöller, Matthias H. Meinke, Arno Feiden

0

citations
Development and Application of an Open-Source Framework for Automated Thermal Network Generation and Simulations in Modelica
2022 Energies article Engineering Integrated Energy Systems Optimization Open access

Michael Mans, Tobias Blacha, Thomas Schreiber, Dirk Müller

9

citations
Automated cleaning of tie point clouds following USGS guidelines in Agisoft Metashape professional (ver. 2.1.0)
2024 MethodsX article Earth and Planetary Sciences 3D Surveying and Cultural Heritage Open access

Joel Mohren, Maximilian Schulze

5

citations