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Unscheduled DNA Synthesis at Sites of Local UV-induced DNA Damage to Quantify Global Genome Nucleotide Excision Repair Activity in Human Cells2023 BIO-PROTOCOL article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Paula J. van der Meer, Diana van den Heuvel, Martijn S. Luijsterburg
12citations -
Cryo-EM structures reveal how ATP and DNA binding in MutS coordinate the sequential steps of DNA mismatch repair2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Alessandro Borsellini, Vladislav Kunetsky, Peter Friedhoff, Meindert Hugo Lamers
1citations -
Multi-pathway DNA-repair reporters reveal competition between end-joining, single-strand annealing and homologous recombination at Cas9-induced DNA double-strand breaks2022 Nature Communications article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access cited by 1 patent
Bert van de Kooij, Alex Kruswick, Haico van Attikum, Michael B. Yaffe
69citations -
PHF2 regulates homology-directed DNA repair by controlling the resection of DNA double strand breaks2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Ignacio Alonso‐de Vega, Maria Cristina Paz‐Cabrera, Magdalena B. Rother, Wouter W. Wiegant, Cintia Checa-Rodríguez, Juan Ramon Hernandez-Fernaud, +4 more
35citations -
Cryogenic electron microscopy structures reveal how ATP and DNA binding in MutS coordinates sequential steps of DNA mismatch repair2022 Nature Structural & Molecular Biology article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Alessandro Borsellini, Vladislav Kunetsky, Peter Friedhoff, Meindert Hugo Lamers
21citations -
Genetic dissection of mutagenic repair and T-DNA capture at CRISPR-induced DNA breaks in Arabidopsis thaliana2024 PNAS Nexus article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Lycka Kamoen, Lejon E. M. Kralemann, Robin van Schendel, Niels van Tol, Paul J. J. Hooykaas, Sylvia de Pater, +1 more
12citations -
Competition between homologous chromosomal DNA and exogenous donor DNA to repair CRISPR/Cas9-induced double-strand breaks in Aspergillus niger2024 Fungal Biology and Biotechnology article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Selina Forrer, Mark Arentshorst, Prajeesh Kooloth-Valappil, Jaap Visser, Arthur F. J. Ram
0citations -
Editorial: Protecting the code: DNA double-strand break repair pathway choice2022 Frontiers in Genetics editorial Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Jenny Kaur Singh, Sylvie M. Noordermeer, Judit Jiménez-Sáinz, David G. Maranon, Matthias Altmeyer
2citations -
Abstract IA015: Using systems approaches to interrogate DNA double strand break signaling and repair for optimal tumor cell killing2024 Cancer Research conference-abstract Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms
Alex Kruswick, Bert van de Kooij, Tiffany R. Emmons, Ganapathy Sriram, Emma D. Martin, Anjali Arvind, +2 more
0citations -
ERCC1mutations impede DNA damage repair and cause liver and kidney dysfunction in patients2020 The Journal of Experimental Medicine article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Katja Apelt, Susan M. White, Hyun Suk Kim, Jung-Eun Yeo, Annelotte P. Wondergem, Martin A. Rooimans, +13 more
36citations -
The interplay of DNA repair context with target sequence predictably biases Cas9-generated mutations2024 Nature Communications article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Ananth Pallaseni, Elin Madli Peets, Gareth Girling, Ivan Kuzmin, Marilin Moor, Núria Muñoz-Subirana, +7 more
18citations -
The interplay of DNA repair context with target sequence predictably biases Cas9-generated mutations2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Ananth Pallaseni, Elin Madli Peets, Gareth Girling, Ivan Kuzmin, Marilin Moor, Núria Muñoz-Subirana, +7 more
1citations -
MUSICiAn: genome-wide identification of genes involved in DNA repair via control-free mutational spectra analysis2026 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Colm Seale, Marco Barazas, Robin van Schendel, Marcel Tijsterman, Joana P. Gonçalves
3citations -
Dealing with transcription-blocking DNA damage: Repair mechanisms, RNA polymerase II processing and human disorders2021 DNA repair article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Nan Jia, Chaowan Guo, Yuka Nakazawa, Diana van den Heuvel, Martijn S. Luijsterburg, Tomoo Ogi
51citations -
The selection process of licensing a DNA mismatch for repair2021 Nature Structural & Molecular Biology article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Rafael Fernández-Leiro, Doreth Bhairosing-Kok, Vladislav Kunetsky, Charlie Laffeber, Herrie H. K. Winterwerp, Flora S. Groothuizen, +5 more
42citations -
DNA mismatch repair controls the mutagenicity of Polymerase ζ-dependent translesion synthesis at methylated guanines2024 DNA repair article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Anastasia Tsaalbi‐Shtylik, Cécile Mingard, Michael H. Räz, Rurika Oka, Freek Manders, Ruben van Boxtel, +2 more
8citations -
Multi-Pathway DNA Double-Strand Break Repair Reporters Reveal Extensive Cross-Talk Between End-Joining, Single Strand Annealing, and Homologous Recombination2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Bert van de Kooij, Alex Kruswick, Haico van Attikum, Michael B. Yaffe
1citations