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SENP6 regulates localization and nuclear condensation of DNA damage response proteins by group deSUMOylation2023 Nature Communications article Biochemistry, Genetics and Molecular Biology Ubiquitin and proteasome pathways Open access
Laura A. Claessens, Matty Verlaan–de Vries, Ilona J. de Graaf, Alfred C.O. Vertegaal
35citations -
Spatio-temporal transcriptomic analysis reveals distinct nephrotoxicity, DNA damage, and regeneration response after cisplatin2025 Cell Biology and Toxicology article Medicine Chemotherapy-induced organ toxicity mitigation Open access cited by 1 patent
Lukas S. Wijaya, Steven J. Kunnen, Panuwat Trairatphisan, Ciaran P. Fisher, Meredith E. Crosby, Kai Schaefer, +11 more
12citations -
Spatio-temporal transcriptomic analysis reveals distinct nephrotoxicity, DNA damage and regeneration response after cisplatin2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Chemotherapy-induced organ toxicity mitigation Open access
Lukas S. Wijaya, Steven J. Kunnen, Panuwat Trairatphisan, Ciaran P. Fisher, Meredith E. Crosby, Kai Schaefer, +11 more
0citations -
Chemo-Phosphoproteomic Profiling with ATR Inhibitors Berzosertib and Gartisertib Uncovers New Biomarkers and DNA Damage Response Regulators2024 Molecular & Cellular Proteomics article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Rathan S Jadav, Florian Weiland, Sylvie M. Noordermeer, Thomas D. Carroll, Yuandi Gao, Jianming Wang, +11 more
8citations -
Towards an advanced testing strategy for genotoxicity using image-based 2D and 3D HepG2 DNA damage response fluorescent protein reporters2021 Mutagenesis article Biochemistry, Genetics and Molecular Biology Carcinogens and Genotoxicity Assessment Open access
Bas ter Braak, Marije Niemeijer, Liesanne Wolters, Sylvia E. Le Dévédec, Peter Bouwman, Bob van de Water
6citations -
Specificity and recognition of the ADP-ribosyl-ubiquitin modification in the DNA damage response2026 PLoS Biology article Biochemistry, Genetics and Molecular Biology Ubiquitin and proteasome pathways Open access
Chatrin Chatrin, Kang Zhu, Michael D. R. Simmons, Lucy Maginn, Kira Schützenhofer, Yang Lu, +9 more
0citations -
The Effect of SF3B1 Mutation on the DNA Damage Response and Nonsense-Mediated mRNA Decay in Cancer2021 Frontiers in Oncology article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access cited by 1 patent
Alexander C. Leeksma, Ingrid A. M. Derks, M. Haidar Kasem, Emine Kılıç, Annelies de Klein, Martine Johanna Jager, +11 more
21citations -
Poly-(ADP-ribose) serves as a scaffold for the methyltransferase METTL3/14 complex in the DNA damage response2025 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Claudia Gonzalez-Leal, Jin Cai, Bram A F J de Groot, Andreas Wegerer, Julia Preißer, Martijn S. Luijsterburg, +1 more
6citations -
Chemo-phosphoproteomic profiling with ATR inhibitors berzosertib and gartisertib uncovers new biomarkers and DNA damage response regulators2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Rathan S Jadav, Florian Weiland, Sylvie M. Noordermeer, Thomas D. Carroll, Yuandi Gao, Jianming Wang, +12 more
1citations -
Ubiquitin Phosphorylation at Thr12 Modulates the DNA Damage Response2020 Molecular Cell article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Franziska Walser, Monique P. C. Mulder, Benoît Bragantini, Tatiana Gubser, Marco Gatti, Maria Victoria Botuyan, +6 more
57citations -
Intracellular H2S production is an autophagy-dependent adaptive response to DNA damage2021 Cell chemical biology article Biochemistry, Genetics and Molecular Biology Sulfur Compounds in Biology Open access
Xiaofeng Jiang, Michael Robert MacArthur, Jose Humberto Trevino-Villarreal, Peter Kip, Charles Keith Ozaki, Sarah Jayne Mitchell, +1 more
25citations -
UBC9 and EME1 sumoylation foster ribosomal DNA damage repair in CPT response2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Easa Nagamalleswari, Bakshi Karishma, Jan Breucker, Michaela Gschweitl, Román González‐Prieto, Nathalie Eisenhardt, +4 more
0citations -
Computational modelling identifies primary mediators of crosstalk between DNA damage and oxidative stress responses2025 PLoS Computational Biology article Biochemistry, Genetics and Molecular Biology Genomics, phytochemicals, and oxidative stress Open access
Elsje J Burgers, Raju P. Sharma, Carl Joshua Eugenio, Muriel M. Heldring, Lukas S. Wijaya, Bob van de Water, +1 more
3citations -
The cooperative action of CSB, CSA, and UVSSA target TFIIH to DNA damage-stalled RNA polymerase II2020 Nature Communications article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Yana van der Weegen, Hadar Golan-Berman, Tycho E.T. Mevissen, Katja Apelt, Román González‐Prieto, Joachim Goedhart, +6 more
185citations -
CIP2A interacts with TopBP1 and is selectively essential for DNA damage-induced basal-like breast cancer tumorigenesis2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Anni Laine, Srikar Goud Nagelli, Caroline C. Farrington, Umar Butt, Anna N. Cvrljevic, Julia P. Vainonen, +17 more
2citations -
Multidimensional OMICs reveal ARID1A orchestrated control of DNA damage, splicing, and cell cycle in normal‐like and malignant urothelial cells2025 Molecular Oncology article Biochemistry, Genetics and Molecular Biology Chromatin Remodeling and Cancer Open access
R. Schlosser, Florian Krumbach, Eyleen Corrales, Geoffroy Andrieux, Christian Preisinger, Franziska Liss, +6 more
3citations -
Publisher Correction: The cooperative action of CSB, CSA, and UVSSA target TFIIH to DNA damage-stalled RNA polymerase II2020 Nature Communications erratum Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Yana van der Weegen, Hadar Golan-Berman, Tycho E.T. Mevissen, Katja Apelt, Román González‐Prieto, Joachim Goedhart, +6 more
4citations