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MedShapeNet – a large-scale dataset of 3D medical shapes for computer vision2024 Biomedizinische Technik/Biomedical Engineering article Engineering 3D Shape Modeling and Analysis Open access
Jianning Li, Zongwei Zhou, Jiancheng Yang, Antonio Pepe, Christina Gsaxner, Gijs Luijten, +93 more
36citations -
AI Species Identification Using Image and Sound Recognition for Citizen Science, Collection Management and Biomonitoring: From Training Pipeline to Large-Scale Models2024 Biodiversity Information Science and Standards article Computer Science Advanced Neural Network Applications Open access
Laurens Hogeweg, Django Brunink, Khadija Ezzaki-Chokri, Wilfred Gerritsen, Rita Pucci, Burooj Ghani, +2 more
3citations -
Enabling Community Curation of Biological Source Annotations of Molecular Data Through PlutoF and the ELIXIR Contextual Data Clearinghouse2022 Biodiversity Information Science and Standards article Computer Science Research Data Management Practices Open access
Vishnukumar Balavenkataraman Kadhirvelu, Kessy Abarenkov, Allan Zirk, Joana Paupério, Guy Cochrane, Suran Jayathilaka, +6 more
3citations -
Purposeful decision-support with Digital Shadows: a model catalog architecture and its implementation for production scheduling in the injection molding domain2025 International Journal of Production Research article Engineering Digital Transformation in Industry Open access
Patrick Sapel, Aymen Gannouni, Anas Abdelrazeq, Christian Hopmann, Robert Heinrich Schmitt
2citations -
Thermostat Control and Window Opening: Impact on Indoor Environmental Conditions and Building Performance2024 Proceedings of BauSIM conference-paper Engineering Building Energy and Comfort Optimization Open access
Ghadeer Derbas, Eziama Ubachukwu, Philipp Althaus, André Xhonneux, Dirk Müller
1citations -
POS0906 USER-FRIENDLY WEBTOOL FOR STRATIFYING DMARD-NAIVE RA PATIENTS INTO PHENOTYPES LINKED TO CLINICAL OUTCOMES2025 Annals of the Rheumatic Diseases conference-abstract Medicine Rheumatoid Arthritis Research and Therapies Open access
Tjardo Daniël Maarseveen, Tom W. J. Huizinga, Erik B. van den Akker, Rachel Knevel
0citations -
Predicting and elucidating the etiology of fatty liver disease: A machine learning modeling and validation study in the IMI DIRECT cohorts2020 PLoS Medicine article Medicine Liver Disease Diagnosis and Treatment Open access cited by 3 patents
Naeimeh Atabaki‐Pasdar, Mattias Ohlsson, Ana Viñuela, Francesca Frau, Hugo Pomares‐Millan, Mark Haid, +57 more
96citations -
The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires2021 Nature Machine Intelligence article Biochemistry, Genetics and Molecular Biology vaccines and immunoinformatics approaches Open access
Milena Pavlović, Lonneke Scheffer, Keshav Motwani, Chakravarthi Kanduri, Radmila Kompova, Nikolay Vazov, +36 more
88citations -
Cyber-Physical Mobility Lab: An Open-Source Platform for Networked and Autonomous Vehicles2021 European Control Conference (ECC) conference-paper Engineering Traffic control and management Open access
Maximilian Kloock, Patrick Scheffe, Janis Maczijewski, Alexandru Kampmann, Armin Mokhtarian, Stefan Kowalewski, +1 more
70citations -
A roadmap to the molecular human linking multiomics with population traits and diabetes subtypes2024 Nature Communications article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Anna Halama, Shaza B. Zaghlool, Gaurav Thareja, Sara Abdul Kader, Wadha Al‐Muftah, Marjonneke J. Mook-Kanamori, +19 more
35citations -
B io ‐D em , a tool to explore the relationship between biodiversity data availability and socio‐political conditions in time and space2021 Journal of Biogeography article Environmental Science Species Distribution and Climate Change Open access
Alexander Zizka, Oskar Rydén, Daniel Edler, Johannes T. Klein, Allison Perrigo, Daniele Silvestro, +3 more
30citations -
The Quality Evaluation of Rare Disease Registries—An Assessment of the Essential Features of a Disease Registry2021 International Journal of Environmental Research and Public Health article Computer Science Research Data Management Practices Open access
Salma Ali, Jillian Bryce, Yllka Kodra, Domenica Taruscio, Luca Persani, S. Faisal Ahmed
23citations -
LogoMotif: A Comprehensive Database of Transcription Factor Binding Site Profiles in Actinobacteria2024 Journal of Molecular Biology article Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Hannah E. Augustijn, Dimitris Karapliafis, K. Joosten, Sébastien Rigali, Gilles P. van Wezel, Marnix H. Medema
20citations -
immuneML: an ecosystem for machine learning analysis of adaptive immune receptor repertoires2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology vaccines and immunoinformatics approaches Open access
Milena Pavlović, Lonneke Scheffer, Keshav Motwani, Chakravarthi Kanduri, Radmila Kompova, Nikolay Vazov, +37 more
17citations -
plantiSMASH 2.0: Improvements to Detection, Annotation, and Prioritization of Plant Biosynthetic Gene Clusters2026 Journal of Molecular Biology article Medicine Microbial Natural Products and Biosynthesis Open access
Elena Del Pup, Charlotte Owen, Hannah E. Augustijn, Arjan Draisma, Guy Polturak, Satria Ardhe Kautsar, +3 more
11citations -
LLEC Energy Dashboard Suite: User Engagement for Energy-Efficient Behavior Using Dashboards and Gamification2023 International Conference on Efficiency, Cost, Optimization, Simulation and Environmental Impact of Energy Systems (ECOS) conference-paper Engineering Building Energy and Comfort Optimization Open access
Eziama Ubachukwu, Jana Pick, Lea Riebesel, Paul Lieberenz, Philipp Althaus, Dirk Müller, +1 more
6citations