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DeepVF: a deep learning-based hybrid framework for identifying virulence factors using the stacking strategy2020 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Ruopeng Xie, Jiahui Li, Jiawei Wang, Wei Dai, André Leier, Tatiana T. Marquez‐Lago, +4 more
90citations -
Application of Machine Learning in Nanotoxicology: A Critical Review and Perspective2024 Environmental Science & Technology article Materials Science Machine Learning in Materials Science Open access
Yunchi Zhou, Ying Wang, Willie J.G.M. Peijnenburg, Martina G. Vijver, Surendra Balraadjsing, Zhaomin Dong, +9 more
32citations -
Deep learning on CT scans to predict checkpoint inhibitor treatment outcomes in advanced melanoma2024 Scientific Reports article Medicine Radiomics and Machine Learning in Medical Imaging Open access
Laurens S. ter Maat, Rob A. J. de Mooij, Isabella A.J. van Duin, Joost J.C. Verhoeff, Sjoerd Geert Elias, Tim Leiner, +20 more
2citations -
Computing formation enthalpies through an explainable machine learning method: the case of lanthanide orthophosphates solid solutions2024 Frontiers in Applied Mathematics and Statistics article Materials Science Machine Learning in Materials Science Open access
Edoardo Di Napoli, Xinzhe Wu, Thomas Bornhake, Piotr M. Kowalski
1citations -
DrugEx v2: de novo design of drug molecules by Pareto-based multi-objective reinforcement learning in polypharmacology2021 Journal of Cheminformatics article Computer Science Computational Drug Discovery Methods Open access cited by 1 patent
Xuhan Liu, Kai Ye, Herman van Vlijmen, Michael Emmerich, Adriaan P. IJzerman, Gerard J. P. van Westen
118citations -
Induced network-based transfer learning in injection molding for process modelling and optimization with artificial neural networks97citations
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Exploring Conformational Transitions of Adenine RNA Dimer via Machine Learning Potentials2026 Journal of Chemical Theory and Computation article Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access
Leonardo Rafael Medrano Sandonas, Macarena Tolmos Nehme, Luis Fernando Cofas‐Vargas, Gustavo E. Olivos-Ramírez, Gianaurelio Cuniberti, Simón Poblete, +1 more
0citations -
Addressing the Data Scarcity Problem in Ecotoxicology via Small Data Machine Learning Methods2025 Environmental Science & Technology article Environmental Science Environmental Toxicology and Ecotoxicology Open access
Ying Wang, Yunchi Zhou, Yinghao Cheng, Xiaoli Zhao, Willie J.G.M. Peijnenburg, Martina G. Vijver, +3 more
55citations -
End-to-end prognostication in colorectal cancer by deep learning: a retrospective, multicentre study2023 The Lancet Digital Health article Computer Science AI in cancer detection Open access cited by 1 patent
Xiaofeng Jiang, Michael Hoffmeister, Hermann Brenner, Hannah Sophie Muti, Tanwei Yuan, Sebastian Foersch, +13 more
108citations -
Predicting ICU Mortality in Acute Respiratory Distress Syndrome Patients Using Machine Learning: The Predicting Outcome and STratifiCation of severity in ARDS (POSTCARDS) Study*
Jesús Villar, Jesús María González-Martín, Jerónimo Hernández-González, Miguel Ángel Armengol de la Hoz, Cristina Fernández, Carmen Martín-Rodríguez, +14 more
52citations -
3D deformable registration of longitudinal abdominopelvic CT images using unsupervised deep learning2021 Computer Methods and Programs in Biomedicine article Computer Science Medical Image Segmentation Techniques Open access
Maureen A.J.M. van Eijnatten, Leonardo Rundo, Kees Joost Batenburg, Felix F. Lucka, Emma J. Beddowes, Carlos H. Caldas, +4 more
17citations -
Development and validation of a machine learning-supported strategy of patient selection for osteoarthritis clinical trials: the IMI-APPROACH study2023 Osteoarthritis and Cartilage Open article Medicine Osteoarthritis Treatment and Mechanisms Open access
Paweł Widera, Paco M J Welsing, Samuel Danso, Sjaak Peelen, M. Kloppenburg, Marieke Loef, +13 more
12citations