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Giant RNA genomes: Roles of host, translation elongation, genome architecture, and proteome in nidoviruses2025 Proceedings of the National Academy of Sciences article Agricultural and Biological Sciences Animal Virus Infections Studies Open access
Benjamin W. Neuman, Alexandria Smart, Orian Gilmer, Redmond P. Smyth, Josef Vaas, Nicolai Böker, +6 more
22citations -
Insights from the first genome assembly of Onion ( Allium cepa )2021 G3 Genes Genomes Genetics article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access cited by 1 patent
Richard Finkers, Martijn van Kaauwen, Kai Ament, Karin Burger-Meijer, Raymond Egging, Henk Huits, +7 more
93citations -
Insights from the first genome assembly of Onion ( Allium cepa )2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access
Richard Finkers, Martijn van Kaauwen, Kai Ament, Karin Burger-Meijer, Raymond Egging, Henk Huits, +7 more
6citations -
Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi2023 Nature Communications article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access
Yogesh Kumar Gupta, Francismar Corrêa Marcelino‐Guimarães, Cécile Lorrain, Andrew D Farmer, Sajeet Haridas, Everton Geraldo Capote Ferreira, +49 more
58citations -
A Solanum lycopersicoides reference genome facilitates biological discovery in tomato2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access
Adrian F. Powell, Lance Courtney, Maximilian Schmidt, Ari Feder, Alexander Vogel, Yimin Xu, +18 more
9citations -
Genome skimming reveals novel plastid markers for the molecular identification of illegally logged African timber species2021 PLoS ONE article Biochemistry, Genetics and Molecular Biology Identification and Quantification in Food Open access
Maurizio Mascarello, Mario Amalfi, Pieter Asselman, ERIK F. SMETS, Olivier J. Hardy, Hans Beeckman, +1 more
28citations -
IAGS: Inferring Ancestor Genome Structure under a Wide Range of Evolutionary Scenarios2022 Molecular Biology and Evolution article Biochemistry, Genetics and Molecular Biology Genome Rearrangement Algorithms Open access
Shenghan Gao, Xiaofei Yang, Jianyong Sun, Xixi Zhao, Bo Wang, Kai Ye
18citations -
A Genome-Scale Metabolic Model for the Smut-Fungus Ustilago maydis2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Ulf W. Liebal, Lena Ullmann, Christian Lieven, Philipp Kohl, Daniel Wibberg, Thiemo Zambanini, +1 more
1citations -
Single-Cell RNA Sequencing Maps Endothelial Metabolic Plasticity in Pathological Angiogenesis2020 Cell Metabolism article Biochemistry, Genetics and Molecular Biology Angiogenesis and VEGF in Cancer Open access
Kateřina Rohlenová, Jermaine Goveia, Melissa García‐Caballero, Abhishek Subramanian, Joanna Maria Kalucka, Lucas Treps, +33 more
307citations -
A genome-wide approach for the discovery of novel repeat expansion disorders in the Undiagnosed Diseases Network cohort2025 Genetics in Medicine article Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Sarah Fazal, Harriet Dashnow, Maike Franziska Dohrn, Jacquelyn Schatzman Raposo, Laurel Hiatt, Matt Christopher Danzi, +27 more
3citations -
Comparison of genome-wide gene expression profiling by RNA Sequencingversusmicroarray in bronchial biopsies of COPD patients before and after inhaled corticosteroid treatment: does it provide new insights?2021 ERJ Open Research article Medicine Chronic Obstructive Pulmonary Disease (COPD) Research Open access
Benedikt Ditz, Jeunard Boekhoudt, Hananeh Aliee, Fabian Joachim Theis, Martijn C. Nawijn, Corry‐Anke Brandsma, +8 more
3citations -
Genome-enabled insights into the biology of thrips as crop pests2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Insect Resistance and Genetics Open access
Dorith Rotenberg, Aaron A. Baumann, Sulley K. Ben-Mahmoud, Olivier Christiaens, Wannes Dermauw, Panagiotis Ioannidis, +50 more
15citations -
Chromosome‐scale Salvia hispanica L. (Chia) genome assembly reveals rampant Salvia interspecies introgression2024 The Plant Genome article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access
Julia Brose, John P. Hamilton, Nicholas J. Schlecht, Dongyan Zhao, Paulina M. Mejía‐Ponce, Arely Cruz‐Pérez, +8 more
4citations -
The genome sequence of Rhynchonycteris naso, Peters, 1867 (Chiroptera, Emballonuridae, Rhynchonycteris)2024 Wellcome Open Research article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ine Alvarez van Tussenbroek, Mirjam Knörnschild, Martina Nagy, Brian P O'Toole, Giulio Formenti, Philip Philge, +10 more
2citations -
Ustilago maydis Metabolic Characterization and Growth Quantification with a Genome-Scale Metabolic Model2022 Journal of Fungi article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Ulf W. Liebal, Lena Ullmann, Christian Lieven, Philipp Kohl, Daniel Wibberg, Thiemo Zambanini, +1 more
18citations -
Complete Genome Sequence and Annotation of the Paracoccus pantotrophus Type Strain DSM 29442020 Microbiology Resource Announcements article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Julia A. Bockwoldt, Martín Zimmermann, Till Tiso, Lars M. Blank
14citations -
Expanding the genome information on Bacillales for biosynthetic gene cluster discovery2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Microbial Natural Products and Biosynthesis Open access
Lijie Song, Lasse Johan Dyrbye Nielsen, Xinming Xu, Omkar S. Mohite, Matin Nuhamunada, Zhihui Xu, +7 more
0citations -
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Ann M. Mc Cartney, Giulio Formenti, Alice Mouton, Diego N. De Panis, Luísa S. Marins, Henrique G. Leitão, +93 more
15citations -
Long‐Read Sequencing Enhances Pharmacogenomic Profiling by Resolving Complex Haplotypes, Novel Star Alleles, and Structural Variants2025 Clinical Pharmacology & Therapeutics article Pharmacology, Toxicology and Pharmaceutics Pharmacogenetics and Drug Metabolism Open access
Sumudu Rangika Samarasinghe, Andrea Gaedigk, Jesse Joachim Swen, Henk‐Jan Guchelaar, Shivashankar Hiriyur Nagaraj
6citations -
Supplementary dara for "Genome-inspired cultivation of bacteria from deep-sea sponge Geodia barretti"2026 Zenodo (CERN European Organization for Nuclear Research) supplementary-materials Biochemistry, Genetics and Molecular Biology Marine Sponges and Natural Products Open access
Pavlo Hrab, M Muller, Sophie Elise Smit, Michelle Schorn, Catarina Loureiro, Marnix H. Medema, +1 more
0citations