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Peer Review Report For: Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT [version 1; peer review: 1 approved, 1 approved with reservations]
Maxime Borry, Adrian Forsythe, Aida Andrades Valtueña, Alexander Hübner, Anan Ibrahim, Andrea Quagliariello, +34 more
0citations -
The GA4GH Phenopacket schema: A computable representation of clinical data for precision medicine2021 medRxiv preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Julius O.B. Jacobsen, Michael Baudis, Gareth S Baynam, J. Beckmann, Sergi Beltrán, Tiffany J. Callahan, +41 more
14citations -
Peer Review Report For: BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services [version 1; peer review: 2 approved with reservations]
Toshiaki Katayama, Shuichi Kawashima, Gos Micklem, Shin Kawano, Jin-Dong Kim, Simon Kocbek, +70 more
0citations -
Peer Review Report For: BioHackathon 2015: Semantics of data for life sciences and reproducible research [version 1; peer review: 2 approved]2020 University of Southampton peer-review Computer Science Research Data Management Practices Open access
Rutger Aldo Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, +68 more
0citations -
Translatability of WGS typing results can simplify data exchange for surveillance and control of Listeria monocytogenes2020 Microbial Genomics article Biochemistry, Genetics and Molecular Biology Listeria monocytogenes in Food Safety Open access
Stefanie Lüth, Carlus Deneke, Sylvia Kleta, Sascha Al Dahouk
24citations -
Genolator enables protein function interpretation using a multimodal large language model fusing genomic and structural interpretation with natural language interaction2026 Genome biology article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Martin Danner, Tanhim Islam, Matthias Begemann, Florian Kraft, Miriam Elbracht, Ingo Kurth, +1 more
0citations -
Peer Review Report For: Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT [version 2; peer review: 1 approved, 3 approved with reservations]
Maxime Borry, Adrian Forsythe, Aida Andrades Valtueña, Alexander Hübner, Anan Ibrahim, Andrea Quagliariello, +34 more
0citations -
Peer Review Report For: Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT [version 2; peer review: 1 approved, 3 approved with reservations]
Maxime Borry, Adrian Forsythe, Aida Andrades Valtueña, Alexander Hübner, Anan Ibrahim, Andrea Quagliariello, +34 more
0citations -
Heidelberg Perioperative Deep Data Registry and Biomaterial Bank (HeiPoDD Registry and Bio Bank): study protocol for a prospective single-centre registry and biobank for patients undergoing high-risk non-cardiac surgery in a German university hospital
Hans Thomas Hölzer, Christian Niklas, Solveig Tenckhoff, Manuel Feißt, Tobias Hölle, Martin Dugas, +12 more
2citations -
DEMETER: efficient simultaneous curation of genome-scale reconstructions guided by experimental data and refined gene annotations2021 Bioinformatics article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Almut Heinken, Stefanía Magnúsdóttir, Ronan M. T. Fleming, Ines Thiele
32citations -
Towards Bayesian-based quantitative adverse outcome pathways using in vitro data from open literature and continuous variables: a case example for liver fibrosis2026 Toxicological Sciences article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Robin Durník, Tereza Juchelková, Helge Hecht, Levi M. T. Winkelman, Joost B. Beltman, Xavier Coumoul, +4 more
1citations -
Towards Bayesian-based quantitative adverse outcome pathways using in vitro data from open literature and continuous variables: a case example for liver fibrosis2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Robin Durník, Tereza Juchelková, Helge Hecht, Levi M. T. Winkelman, Joost B. Beltman, Xavier Coumoul, +4 more
0citations -
Moving Beyond Morphology: Genomic Insights Into Evolutionary Histories of Haplosclerid Sponges2025 Zoologica Scripta article Biochemistry, Genetics and Molecular Biology Marine Sponges and Natural Products Open access
Joëlle van der Sprong, Nicole Joy de Voogd, Simone Schätzle, Nora Dotzler, Sergio Vargas, Gert Wörheide, +1 more
6citations -
SASpector: analysis of missing genomic regions in draft genomes of prokaryotes2022 Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Cédric Lood, Alejandro Correa Rojo, Deniz Sinar, Emma Verkinderen, Rob Lavigne, Vera van Noort
1citations