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DNA methylation changes during long-term in vitro cell culture are caused by epigenetic drift2021 Communications Biology article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access cited by 3 patents
Julia Franzen, Theodoros Georgomanolis, Anton Selich, Chao‐Chung Kuo, Reinhard J. Stöger, Lilija Brant, +12 more
92citations -
Associations between habitual diet, metabolic disease, and the gut microbiota using latent Dirichlet allocation2021 Microbiome article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Taylor A. Breuninger, Nina Wawro, Jakob Breuninger, Sandra Reitmeier, Thomas Clavel, Julia Six-Merker, +8 more
86citations -
Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome2023 Environmental Microbiome article Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Lucas William Mendes, Jos M. Raaijmakers, Mattias de Hollander, Edis Sepo, Ruth Gómez Expósito, Alisson Fernando Chiorato, +3 more
71citations -
External validation of models for KIR2DS1/KIR3DL1-informed selection of hematopoietic cell donors fails2020 Blood article Immunology and Microbiology Immune Cell Function and Interaction Open access cited by 3 patents
Johannes Schetelig, Henning Baldauf, Falk Heidenreich, Carolin Massalski, Sandra Kay Frank, Jürgen Sauter, +16 more
55citations -
Microbial and volatile profiling of soils suppressive to Fusarium culmorum of wheat2020 Proceedings of the Royal Society B Biological Sciences article Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Adam Ossowicki, Vittorio Tracanna, Marloes L. C. Petrus, Gilles van Wezel, Jos M. Raaijmakers, Marnix H. Medema, +1 more
46citations -
Epigenetic Clocks Are Not Accelerated in COVID-19 Patients2021 International Journal of Molecular Sciences article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access
Julia Franzen, Selina Nüchtern, Vithurithra Tharmapalan, Margherita Vieri, Miloš Nikolić, Yang Han, +7 more
46citations -
The Bacterial Gut Microbiota of Adult Patients Infected, Colonized or Noncolonized by Clostridioides difficile2020 Microorganisms article Medicine Clostridium difficile and Clostridium perfringens research Open access cited by 1 patent
Monique J. T. Crobach, Quinten R. Ducarmon, Elisabeth M. Terveer, Céline Harmanus, Ingrid M. J. G. Sanders, Kees Verduin, +2 more
46citations -
Global warming shifts the composition of the abundant bacterial phyllosphere microbiota as indicated by a cultivation-dependent and -independent study of the grassland phyllosphere of a long-term warming field experiment2020 FEMS Microbiology Ecology article Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Ebru L. Aydogan, O. Budich, Martin Hardt, Young Hae Choi, Anne Jansen‐Willems, Gerald M. Moser, +3 more
44citations -
Gut Microbiota and Dietary Intake of Normal-Weight and Overweight Filipino Children2020 Microorganisms article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access cited by 1 patent
Maria Julia Golloso-Gubat, Quinten R. Ducarmon, Robby Carlo Tan, Romy Daniëlle Zwittink, Ed J. Kuijper, Jacus S. Nacis, +1 more
40citations -
Nasal microbiota dominated by Moraxella spp. is associated with respiratory health in the elderly population: a case control study2020 Respiratory Research article Immunology and Microbiology Microbial infections and disease research Open access
Ellen H. A. van den Munckhof, Harriët C. Hafkamp, Josephine de Kluijver, Ed J. Kuijper, Maurits N.C. de Koning, Wim G.V. Quint, +1 more
34citations -
Microbiomes of a specialist caterpillar are consistent across different habitats but also resemble the local soil microbial communities2020 Animal Microbiome article Agricultural and Biological Sciences Insect symbiosis and bacterial influences Open access
Sofia I. F. Gomes, Anna Maria Kielak, S. Emilia Hannula, Robin Heinen, Renske Jongen, Ivor Keesmaat, +2 more
32citations -
PRDM8 reveals aberrant DNA methylation in aging syndromes and is relevant for hematopoietic and neuronal differentiation2020 Clinical Epigenetics article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access cited by 2 patents
Olivia Cypris, Monika Eipel, Julia Franzen, Corinna Rösseler, Vithurithra Tharmapalan, Chao‐Chung Kuo, +8 more
31citations -
Taxonomic and functional analyses of intact microbial communities thriving in extreme, astrobiology-relevant, anoxic sites2021 Microbiome article Environmental Science Microbial Community Ecology and Physiology Open access
Alexandra Kristin Bashir, Lisa Wink, Stefanie Duller, Petra Schwendner, Charles S. Cockell, Petra Rettberg, +22 more
25citations -
Haplotype Motif-Based Models for KIR-Genotype Informed Selection of Hematopoietic Cell Donors Fail to Predict Outcome of Patients With Myelodysplastic Syndromes or Secondary Acute Myeloid Leukemia
Johannes Schetelig, Henning Baldauf, Linda Köster, Michelle Kuxhausen, Falk Heidenreich, Liesbeth C. de Wreede, +16 more
25citations -
Community adaptation to temperature explains abrupt soil bacterial community shift along a geothermal gradient on Iceland2022 Soil Biology and Biochemistry article Environmental Science Microbial Community Ecology and Physiology Open access
James T. Weedon, Erland Bååth, Ruud Rijkers, Stephanie Reischke, Bjarni Didrik Sigurdsson, Edda S. Oddsdóttir, +4 more
24citations -
Back to the roots: defining the core microbiome of Sorghum bicolor in agricultural field soils from the centre of origin2022 FEMS Microbiology Ecology article Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Sewunet Abera, Mahdere Z. Shimels, Taye Tessema, Jos M. Raaijmakers, Francisco Dini‐Andreote
21citations -
Impact of bacterial and fungal inoculants on the resident rhizosphere microbiome and the volatilome of tomato plants under leaf herbivory stress2024 FEMS Microbiology Ecology article Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Ana Shein Lee Díaz, Zhivko Minchev, Jos M. Raaijmakers, Maria Jose Pozo, Paolina Garbeva
20citations -
Frequency of KCNQ1 variants causing loss of methylation of Imprinting Centre 2 in Beckwith-Wiedemann syndrome2020 Clinical Epigenetics article Biochemistry, Genetics and Molecular Biology Genetic Syndromes and Imprinting Open access
Carla Eßinger, Stephanie Karch, Ute Moog, György Fekete, Anna Lengyel, Éva Pinti, +2 more
17citations -
Combined effects of azoxystrobin and oxytetracycline on rhizosphere microbiota of Arabidopsis thaliana2024 Environment International article Environmental Science Pesticide and Herbicide Environmental Studies Open access
Mingjing Ke, Zhitao Yu, Chaotang Lei, Meng Liu, Yaohui Yang, Tao Lu, +4 more
17citations -
Dynamics of the bacterial gut microbiota during controlled human infection with Necator americanus larvae2020 Gut Microbes article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Quinten R. Ducarmon, Marie-Astrid Hoogerwerf, Jacqueline J. Janse, Anoecim Robecca Geelen, Jan Pieter R. Koopman, Romy Daniëlle Zwittink, +3 more
17citations