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Cell-type, single-cell, and spatial signatures of brain-region specific splicing in postnatal development2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Anoushka Joglekar, Andrey D. Prjibelski, Ahmed Essam Mahfouz, Paul G. Collier, Susan Lin, Anna Katharina Schlusche, +22 more
5citations -
Alternative mRNA Splicing Controls the Functions of the Histone H3K27 Demethylase UTX/KDM6A2023 Cancers article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Omid Fotouhi, Sheikh Nizamuddin, Stephanie Falk, Oliver Schilling, Ruth Knüchel, Martin Lothar Biniossek, +1 more
6citations -
Regulatory sites for splicing in human basal ganglia are enriched for disease-relevant information2020 Nature Communications article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Sebastian Guelfi, Karishma D’Sa, Juan Antonio Botía, Jana Vandrovcová, Regina Hertfelder Reynolds, David Zhang, +94 more
39citations -
Molecular characterization of Cdh12-SCON conditional knockout mice reveals unexpected splicing changes2026 Transgenic Research article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Mayke A C Ten Hoor, Margot M. L. Linssen, Conny M. Brouwers, Jill W. C. Claassens, Jaap Mulder, Peter Hohenstein
0citations -
Fusion transcripts and their genomic breakpoints in polyadenylated and ribosomal RNA–minus RNA sequencing data2021 GigaScience article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Youri Hoogstrate, Malgorzata A. Komor, René Böttcher, Job van Riet, Harmen J.G. van de Werken, Stef van Lieshout, +22 more
13citations -
A comparison of metabolic labeling and statistical methods to infer genome-wide dynamics of RNA turnover2021 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Etienne Boileau, Janine Altmüller, Isabel S. Naarmann‐de Vries, Christoph Dieterich
21citations -
Low Molecular Weight Inhibitors Targeting the RNA-Binding Protein HuR2023 International Journal of Molecular Sciences article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Benjamin Philipp Joseph, Verena Weber, Lisa Knüpfer, Alejandro Giorgetti, Mercedes Alfonso‐Prieto, Sybille Krauß, +2 more
10citations -
Depletion of the RNA-binding protein PURA triggers changes in posttranscriptional gene regulation and loss of P-bodies2022 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Lena Molitor, Melina Klostermann, Sabrina Bacher, Juliane Merl‐Pham, Nadine Spranger, Sandra Burczyk, +15 more
25citations -
Depletion of the RNA-binding protein PURA triggers changes in posttranscriptional gene regulation and loss of P-bodies2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Lena Molitor, Melina Klostermann, Sabrina Bacher, Juliane Merl‐Pham, Nadine Spranger, Sandra Burczyk, +15 more
0citations -
RNA-binding proteins control the G2-M checkpoint of the germinal centre B cell2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing
Fiamma Salerno, Alex J. Whale, Louise S. Matheson, William S. Foster, Melanie Stammers, Sarah E. Bell, +4 more
2citations -
An antisense noncoding RNA enhances translation via localized structural rearrangements of its cognate mRNA2021 The Plant Cell article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Rodrigo Siqueira Reis, Jules Deforges, Romy Schmidt, Jos H. M. Schippers, Yves Poirier
33citations -
Transcription and splicing regulation by NLRC5 shape the interferon response in human pancreatic β cells2022 Science Advances article Biochemistry, Genetics and Molecular Biology Diabetes and associated disorders Open access
Florian Szymczak, Maria Inês Alvelos, Sandra Marín‐Cañas, Ângela Castela, Stéphane Demine, Máikel L. Colli, +6 more
39citations -
Antisense Oligonucleotide-Induced Amyloid Precursor Protein Splicing Modulation as a Therapeutic Approach for Dutch-Type Cerebral Amyloid Angiopathy2021 Nucleic Acid Therapeutics article Medicine Alzheimer's disease research and treatments Open access
Elena Daoutsali, Tsinatkeab T. Hailu, Ronald A.M. Buijsen, Barry A. Pepers, Linda M. van der Graaf, Marcel M. Verbeek, +3 more
13citations -
Influence of ATXN2 intermediate CAG repeats, 9bp duplication and alternative splicing on SCA3 pathogenesis2025 Acta Neuropathologica Communications article Neuroscience Genetic Neurodegenerative Diseases Open access
Marilena Lauerer, Jennifer Faber, Nicolas Casadei, Magda M. Santana, Georg W. J. Auburger, Michaela Pogoda, +22 more
3citations -
Multidimensional OMICs reveal ARID1A orchestrated control of DNA damage, splicing, and cell cycle in normal‐like and malignant urothelial cells2025 Molecular Oncology article Biochemistry, Genetics and Molecular Biology Chromatin Remodeling and Cancer Open access
R. Schlosser, Florian Krumbach, Eyleen Corrales, Geoffroy Andrieux, Christian Preisinger, Franziska Liss, +6 more
3citations -
Additional file 1 of Decoding exon inclusion in the human brain reveals more divergent splicing mechanisms in neurons than glia2026 Figshare article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Lieke Michielsen, Justine Hsu, Anoushka Joglekar, Natan Belchikov, Marcel J. T. Reinders, Hagen Tilgner, +1 more
0citations -
Additional file 2 of Decoding exon inclusion in the human brain reveals more divergent splicing mechanisms in neurons than glia2026 Figshare article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Lieke Michielsen, Justine Hsu, Anoushka Joglekar, Natan Belchikov, Marcel J. T. Reinders, Hagen Tilgner, +1 more
0citations -
Additional file 1 of Decoding exon inclusion in the human brain reveals more divergent splicing mechanisms in neurons than glia2026 Figshare article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Lieke Michielsen, Justine Hsu, Anoushka Joglekar, Natan Belchikov, Marcel J. T. Reinders, Hagen Tilgner, +1 more
0citations -
Additional file 2 of Decoding exon inclusion in the human brain reveals more divergent splicing mechanisms in neurons than glia2026 Figshare article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Lieke Michielsen, Justine Hsu, Anoushka Joglekar, Natan Belchikov, Marcel J. T. Reinders, Hagen Tilgner, +1 more
0citations -
Biodistribution of Radioactively Labeled Splice Modulating Antisense Oligonucleotides After Intracerebroventricular and Intrathecal Injection in Mice2024 Nucleic Acid Therapeutics article Biochemistry, Genetics and Molecular Biology RNA Interference and Gene Delivery Open access
Mick M. Welling, Ernst Suidgeest, Esmée Nieuwenhuize, Thomas de Vlaam, Tsinatkeab T. Hailu, Louise van der Weerd, +1 more
5citations -
Skipping Nonsense to Maintain Function: The Paradigm of BRCA2 Exon 122020 Cancer Research article Biochemistry, Genetics and Molecular Biology BRCA gene mutations in cancer
Laëtitia Meulemans, Romy L.S. Mesman, Sandrine M. Caputo, Sophie E. Krieger, Marine Guillaud-Bataille, Virginie Caux‐Moncoutier, +25 more
34citations -
SIRV: spatial inference of RNA velocity at the single-cell resolution2024 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tamim Abdelaal, Laurens Grossouw, R. Jeroen Pasterkamp, Boudewijn P. F. Lelieveldt, Marcel J. T. Reinders, Ahmed Essam Mahfouz
33citations -
SIRV: Spatial inference of RNA velocity at the single-cell resolution2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tamim Abdelaal, Laurens M. Grossouw, R. Jeroen Pasterkamp, Boudewijn P. F. Lelieveldt, Marcel J. T. Reinders, Ahmed Essam Mahfouz
12citations -
Role of Circular RNA MMP9 in Glioblastoma Progression: From Interaction With hnRNPC and hnRNPA1 to Affecting the Expression of BIRC5 by Sequestering miR ‐1492024 Journal of Molecular Recognition article Biochemistry, Genetics and Molecular Biology Circular RNAs in diseases
Javad Amini, Nikta Zafarjafarzadeh, Sara Ghahramanlu, Omid Mohammadalizadeh, Bahram Bibak, Nima Sanadgol
6citations -
Circular RNA MMP9 interacts with HNRNPC and HRNPA1 and potentially influences the expression of BIRC5 by sequestering miR-149 and supporting glioblastoma progress2024 Research Square preprint Biochemistry, Genetics and Molecular Biology Circular RNAs in diseases Open access
Javad Amini, Nikta Zafarjafarzadeh, Sara Ghahramanlu, Omid Mohammadalizadeh, Bahram Bibak, Nima Sanadgol
1citations