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A synthesis and subgroup analysis of the eosinophilic esophagitis tissue transcriptome2023 Journal of Allergy and Clinical Immunology article Medicine Eosinophilic Esophagitis Open access
Justin Jacobse, Rachel E. Brown, Frank L. Revetta, Michael Fredrick Vaezi, Matthew A. Buendia, Christopher S. Williams, +5 more
23citations -
A Combined mRNA- and miRNA-Sequencing Approach Reveals miRNAs as Potential Regulators of the Small Intestinal Transcriptome in Celiac Disease2021 International Journal of Molecular Sciences article Medicine Celiac Disease Research and Management Open access
Ineke L. Tan, Donatella Barisani, Roberto Panceri, Rutger Modderman, Marijn Caroline Visschedijk, Rinse Karel Weersma, +4 more
16citations -
Application of a pharmacological transcriptome filter identifies a shortlist of mouse glucocorticoid receptor target genes associated with memory consolidation
Jacobus C. Buurstede, Eduardo Henrique de Lima Umeoka, Marcia Santos da Silva, Harm J. Krugers, Marian Joëls, Onno Cornelis Meijer
6citations -
Discrimination of Steatotic and Non-Steatotic Chemicals Through Transcriptome Analysis in Primary Human Hepatocytes2026 International Journal of Molecular Sciences article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Christina A. Cramer von Clausbruch, Marcha C. T. Verheijen, Giulia Callegaro, Jonathan H. Freedman, Rita Ortega-Vallbona, Martina Palomino‐Schätzlein, +2 more
1citations -
ADAR1-dependent editing regulates human β cell transcriptome diversity during inflammation2022 Frontiers in Endocrinology article Biochemistry, Genetics and Molecular Biology RNA regulation and disease Open access
Florian Szymczak, Roni Cohen‐Fultheim, Sofia Thomaidou, Alexandra Coomans de Brachène, Ângela Castela, Máikel L. Colli, +4 more
19citations -
Systematic transcriptome-based comparison of cellular adaptive stress response activation networks in hepatic stem cell-derived progeny and primary human hepatocytes2021 Toxicology in Vitro article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Bas ter Braak, Marije Niemeijer, Ruben Boon, Celine Parmentier, Audrey Baze, Lysiane Richert, +4 more
14citations -
Transcriptome Analysis Reveals Contrasting Plant Responses of Sorghum bicolor upon Colonization by Two Formae Speciales of Sporisorium reilianum2022 International Journal of Molecular Sciences article Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Alana Poloni, Ravindra Garde, Lukas Dorian Dittiger, Theresa Heidrich, Frank Drechsler, Yulei Zhao, +2 more
6citations -
Transcriptome analysis of conditionally immortalized atrial myocytes: identification of a novel atrium-enriched protein involved in sarcomere assembly and maintenance2021 European Heart Journal article Biochemistry, Genetics and Molecular Biology Congenital heart defects research Open access
Pim R.R. van Gorp, Juan Zhang, J Liu, Roula Tsonaka, Hailiang Mei, S O Dekker, +6 more
0citations -
Transcriptome sequencing supports a conservation of macrophage polarization in fish2020 Scientific Reports article Immunology and Microbiology Aquaculture disease management and microbiota Open access
Annelieke S. Wentzel, Jules Petit, Wouter G. van Veen, Inge R. Fink, Marleen H. Scheer, María Carla Piazzon, +3 more
45citations -
Direct RNA sequencing enables improved transcriptome assessment and tracking of RNA modifications for medical applications2025 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology RNA modifications and cancer Open access
Charlotte Hewel, Anna Wierczeiko, Johannes Miedema, Johannes H. Friedrich, Stephan Weißbach, Laura Holthöfer, +15 more
39citations -
The role of melanocytes in the human choroidal microenvironment and inflammation: Insights from the transcriptome2021 Pigment Cell & Melanoma Research article Biochemistry, Genetics and Molecular Biology melanin and skin pigmentation
Adrian V. Cioanca, Chieh‐Lin Wu, Riccardo Natoli, Robert Max Conway, Peter McCluskey, Martine Johanna Jager, +3 more
27citations -
A transcriptome atlas of leg muscles from healthy human volunteers reveals molecular and cellular signatures associated with muscle location2023 eLife article Biochemistry, Genetics and Molecular Biology Muscle Physiology and Disorders Open access
Tooba Abbassi‐Daloii, Salma el Abdellaoui, Lenard M. Voortman, Thom T. J. Veeger, Davy Cats, Hailiang Mei, +5 more
19citations -
Sex-dependent gene regulation of human atherosclerotic plaques by DNA methylation and transcriptome integration points to smooth muscle cell involvement in women.2021 Atherosclerosis article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Robin J. G. Hartman, Marten A. Siemelink, Saskia Haitjema, Koen F. Dekkers, Lotte Slenders, Arjan Boltjes, +8 more
10citations -
Cyclic strain has antifibrotic effects on the human cardiac fibroblast transcriptome in a human cardiac fibrosis-on-a-chip platform2023 Journal of the mechanical behavior of biomedical materials/Journal of mechanical behavior of biomedical materials article Medicine Cardiac Fibrosis and Remodeling Open access
Tom C. L. Bracco Gartner, Ye Wang, Laurynas Leiteris, Iris van Adrichem, Judith Marsman, Marie‐José Goumans, +5 more
8citations -
The Transcriptome in Transition: Global Gene Expression Profiles of Young Adult Fruit Flies Depend More Strongly on Developmental Than Adult Diet5citations
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How the liver transcriptome and lipid composition influence the progression of nonalcoholic fatty liver disease to hepatocellular carcinoma in a murine model2024 Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids article Medicine Liver Disease Diagnosis and Treatment Open access
Marvin Leopold, Paola Berenice Mass Sanchez, Marinela Krizanac, Paula Štancl, Rosa Karlić, Patricia Prabutzki, +5 more
2citations -
P20-07 Transcriptome data to substantiate the assessment of similar mechanism of actions in a context of compound induced pulmonary fibrosis2022 Toxicology Letters article Medicine Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
W. Zobl, M. Wehr, J. Koschmann, D. De Luca, B.A. Kühne, H Vrieling, +3 more
0citations -
TRANSCRIPTOME DYNAMICS IN BRONCHIAL EPITHELIAL CELLS FOLLOWING TO CIGARETTE EXPOSURE2021 University of Groningen research database (University of Groningen / Centre for Information Technology) article Medicine Smoking Behavior and Cessation
Rashad Mohammad Mahbub, Anne M. van der Does, Dennis K. Ninaber, Senani N. H. Rathnayake, Corry‐Anke Brandsma, Maarten van den Berge, +4 more
0citations -
Network-based approach identified distinct pathways between lesioned and preserved articular cartilage transcriptome2020 Osteoarthritis and Cartilage article Medicine Osteoarthritis Treatment and Mechanisms Open access
Rodrigo Coutinho de Almeida, Olga Veth, Ahmed Essam Mahfouz, Hailiang Mei, Rob G. H. H. Nelissen, Y.F. Ramos, +2 more
0citations -
Transcriptome Data to Substantiate the Assessment of Similar Mechanism of Actions in a Read-Across Context -a Case Study on Volatile Diketones2021 Toxicology Letters article Biochemistry, Genetics and Molecular Biology Carcinogens and Genotoxicity Assessment
C Stenger Drake, W. Zobl, Harry Vrieling, Jan Boei, Thomas van Overeem Hansen, Sylvia E. Escher
0citations