Papers matching “targeted RNA sequencing” 358
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The long non-coding RNA SAMMSON is essential for uveal melanoma cell survival2021 Oncogene article Biochemistry, Genetics and Molecular Biology Cancer-related molecular mechanisms research Open access
Shanna Dewaele, Louis Delhaye, Boél De Paepe, Eric James de Bony, Jilke De Wilde, Katrien Vanderheyden, +18 more
30citations -
CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Shadi Darvish Shafighi, Szymon M. Kiełbasa, Julieta Sepúlveda-Yáñez, Ramin Monajemi, Davy Cats, Hailiang Mei, +5 more
4citations -
SIngle cell level Genotyping Using scRna Data (SIGURD)2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Martin Graßhoff, Milena Kalmer, Nicolas Chatain, Kim Kricheldorf, Angela Maurer, Ralf Weiskirchen, +2 more
0citations -
SIngle cell level Genotyping Using scRna Data (SIGURD)2024 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Martin Graßhoff, Milena Kalmer, Nicolas Chatain, Kim Kricheldorf, Angela Maurer, Ralf Weiskirchen, +2 more
2citations -
Determining off-target effects of splice-switching antisense oligonucleotides using short read RNAseq in neuronally differentiated human induced pluripotent stem cells2025 Human Molecular Genetics article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Elsa C. Kuijper, Linda van der Graaf, Barry A. Pepers, Mariana Guimarães Ramos, Sylvia Korhorn, Lodewijk J.A. Toonen, +5 more
6citations -
Determining off-target effects of splice-switching antisense oligonucleotides using short read RNAseq in neuronally differentiated human induced pluripotent stem cells2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Elsa C. Kuijper, Linda M. van der Graaf, Barry A. Pepers, Mariana Guimarães Ramos, Sylvia Korhorn, Davy Cats, +4 more
1citations -
CaClust: linking genotype to transcriptional heterogeneity of follicular lymphoma using BCR and exomic variants2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Kazimierz Oksza-Orzechowski, Edwin Quinten, Shadi Darvish Shafighi, Szymon M. Kiełbasa, Hugo W van Kessel, Ruben A. L. de Groen, +6 more
1citations -
Discovery of the order ‘ Quisvirales ’ redefines the evolution of RNA replication and transcription in the phylum Pisuviricota2026 Virus Evolution article Agricultural and Biological Sciences Animal Virus Infections Studies Open access
Alexander E. Gorbalenya, Dmitry V. Samborskiy, Benjamin W. Neuman, Chris Lauber
1citations -
Roles for the long non-coding RNA Pax6os1 / PAX6-AS1 in pancreatic beta cell identity and function2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic function and diabetes Open access
Livia López–Noriega, Rebecca Callingham, Aida Martínez-Sánchez, Sameena Nawaz, Grazia Pizza, Nejc Haberman, +13 more
6citations -
Epitranscriptomic alterations induced by environmental toxins: implications for RNA modifications and disease2025 Genes and Environment review Biochemistry, Genetics and Molecular Biology RNA modifications and cancer Open access
Esther Ugo Alum, Regina Idu Ejemot-Nwadiaro, Mariam Basajja, Daniel Ejim Uti, Okechukwu Paul-Chima Ugwu, Patrick Maduabuchi Aja
16citations -
CRISPR/Cas9 Mutagenesis by Translocation of Cas9 Protein Into Plant Cells via the Agrobacterium Type IV Secretion System2020 Frontiers in Genome Editing article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access
Daan J. Schmitz, Zahir Ali, Chenglong Wang, Fatimah Aljedaani, Paul J. J. Hooykaas, Magdy M. Mahfouz, +1 more
23citations -
The RNA-binding profile of the splicing factor SRSF6 in immortalized human pancreatic β-cells2020 Life Science Alliance article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Maria Inês Alvelos, Mirko Brüggemann, F.X. Reymond Sutandy, Máikel L. Colli, Anke Busch, Miguel Lopes, +5 more
22citations -
Exome sequencing links the SUMO protease SENP7 with fatal arthrogryposis multiplex congenita, early respiratory failure and neutropenia2023 Journal of Medical Genetics article Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Nadra Nasser Samra, Nicolette S. Jansen, Ilham Morani, Reli Rachel Kakun, Rinat Zaid, Tamar Paperna, +14 more
8citations -
A scalable and equitable framework for target and patient prioritisation in rare disease antisense therapeutics2026 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Ella F. Whittle, Kylie Montgomery, Carme Camps, Nour M. Elkhateeb, Catherine Ryan, Sara Aguti, +26 more
1citations