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Partitioning variability in animal behavioral videos using semi-supervised variational autoencoders2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Human Pose and Action Recognition Open access
Matthew R Whiteway, Dan Biderman, Yoni Friedman, Mario Dipoppa, E. Kelly Buchanan, Anqi Wu, +11 more
9citations -
The modified elevated gap interaction test: A novel paradigm to assess social preference2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Autism Spectrum Disorder Research Open access
Chris I. De Zeeuw, Siyang Yu, Jiawei Chen, Willem Sebastiaan van Hoogstraten, Arn M. J. M. van den Maagdenberg, Laurens W. J. Bosman, +1 more
2citations -
Dyrk1a inhibition with the Novel Compound DYR533: A Cross-Disease Therapeutic Strategy Targeting Amyloidosis, Tau Pathogenesis, and Neuroinflammation2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Alzheimer's disease research and treatments Open access
Samantha K. Bartholomew, Julie Turk, Wendy Winslow, Christopher Foley, Arthur Y. Shaw, Samantha Rokey, +12 more
1citations -
Reference-based cell type matching of spatial transcriptomics data2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Yun Zhang, Jeremy A. Miller, Jeongbin Park, Boudewijn P. F. Lelieveldt, Brian Long, Tamim Abdelaal, +12 more
5citations -
Human neurons undergo protracted functional maturation into adulthood2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neural dynamics and brain function Open access
Matthijs B Verhoog, Roxanne M Hattingh, Pia Scharein, Tariro A Chatiza, Nawaal Samsodien, Yanelisa Pulani, +15 more
0citations -
Expression-based selection identifies a microglia-tropic AAV capsid for direct and CSF routes of administration in mice2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Virus-based gene therapy research Open access cited by 1 patent
Miguel C. Santoscoy, Paula Espinoza, Killian S. Hanlon, Lisa Nieland, Carrie Ng, Christian Elias Badr, +7 more
2citations -
Cross-species consensus atlas of the primate basal ganglia2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Nelson Johansen, Yuanyuan Fu, Matthew T. Schmitz, Alma Dubuc, Niklas Kempynck, Morgan E. Wirthlin, +87 more
11citations -
Erbb4 deletion from fast-spiking interneurons causes psychosis-relevant neuroimaging phenotypes2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Schizophrenia research and treatment Open access
Amanda Kiemes, Maria Elisa Serrano Navacerrada, Eugene Kim, Karen Randall, Camilla Simmons, Loreto Rojo Gonzalez, +11 more
1citations -
EEG-based visual deviance detection in freely behaving mice2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neural dynamics and brain function Open access
Renate Kat, Berry van den Berg, Matthijs Perenboom, Maarten Schenke, Arn M. J. M. van den Maagdenberg, Hilgo Bruining, +2 more
0citations -
Identification of small-molecule enhancers of circadian rhythm amplitude in central and peripheral clocks2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Circadian rhythm and melatonin Open access
Maitreyi S. Joshi, Felix Albert, Johanna H. Meijer, Stephan H. Michel, Paul P. Geurink
0citations -
The Neurolipid Atlas: a lipidomics resource for neurodegenerative diseases uncovers cholesterol as a regulator of astrocyte reactivity impaired by ApoE42024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Alzheimer's disease research and treatments Open access
Femke M. Feringa, Sascha Koppes-den Hertog, Lian Y. Wang, Rico J. E. Derks, Iris Daphne Kruijff, Lena Erlebach, +21 more
22citations -
Antagonistic roles of canonical and alternative RPA in tandem CAG repeat diseases2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Genetic Neurodegenerative Diseases Open access
Terence Gall-Duncan, Jennifer Luo, Carla-Marie Jurkovic, Laura A. Fischer, Kyota Fujita, David E. Leib, +28 more
1citations -
A resource for generating and manipulating human microglial states in vitro2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neuroinflammation and Neurodegeneration Mechanisms Open access
Michael-John Dolan, Martine Therrien, Saša Jereb, Tushar Kamath, Trevor Atkeson, Samuel E. Marsh, +16 more
12citations -
Endothelial cannabinoid CB1 receptor deficiency reduces arterial inflammation and lipid uptake in response to atheroprone shear stress2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cannabis and Cannabinoid Research Open access
Bingni Chen, Aishvaryaa Prabhu, Li Guo, Anna Cristina Kaltenbach, Yong Wang, George Shakir, +18 more
2citations -
Evaluation of calcium-sensitive adenylyl cyclase AC1 and AC8 mRNA expression in the anterior cingulate cortex of mice with neuropathic pain2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pain Mechanisms and Treatments Open access
Stephanie I. Shiers, Hajira Elahi, Stephanie Hennen, Theodore John Price
1citations -
Itaconate enhances oncolytic virotherapy by multitarget inhibition of antiviral and inflammatory pathways2023 Research Square preprint Biochemistry, Genetics and Molecular Biology Virus-based gene therapy research Open access
Naziia Kurmasheva, Aida Said, Boaz Wong, Alena Kress, Zhenlong Liu, Chen Wang, +34 more
0citations -
Tsc1 haploinsufficiency leads to Pax2 dysregulation in the developing murine cerebellum2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Tuberous Sclerosis Complex Research Open access
Ines Serra, Ana Stravs, Catarina Osório, Maria Roa Oyaga, Martijn Schonewille, Christian Tudorache, +1 more
0citations -
A unified rodent atlas reveals the cellular complexity and evolutionary divergence of the dorsal vagal complex2025 eLife preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Cecilia Hes, Abigail J. Tomlinson, Lieke Michielsen, Hunter J Murdoch, Maia V. Kokoeva, Paul V. Sabatini
5citations -
Human Neocortical Glutamatergic Neurons Revealed Through Multimodal Profiling2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Rachel A. Dalley, Sarah Walling-Bell, Jeremy A. Miller, Femke Waleboer, Julian Thijssen, Audrey McCutcheon, +88 more
3citations -
A unified rodent atlas reveals the cellular complexity and evolutionary divergence of the dorsal vagal complex2025 eLife preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Cecilia Hes, Abigail J. Tomlinson, Lieke Michielsen, Hunter J Murdoch, Maia V. Kokoeva, Paul V. Sabatini
1citations -
AAV-Delivered Anti-PC-OxPL Antibody Fragments: A Novel Therapeutic Approach to Target ALS2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Amyotrophic Lateral Sclerosis Research
Andreia Gomes‐Duarte, Jamie K. Wong, Svetlana Pasteuning-Vuhman, Wouter Pos, Rob Haselberg, Marina Sogorb-González, +6 more
1citations