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An integrated spatio-temporal view of riverine biodiversity using environmental DNA metabarcoding2024 Nature Communications article Environmental Science Environmental DNA in Biodiversity Studies Open access
William Bernard Perry, Mathew Seymour, Luisa Orsini, Ifan Bryn Jâms, Nigel J. Milner, François Edwards, +16 more
86citations -
Effects of antidepressant exposure on aquatic communities assessed by a combination of morphological identification, functional measurements, environmental DNA metabarcoding and bioassays2023 Chemosphere article Environmental Science Pharmaceutical and Antibiotic Environmental Impacts Open access
Lara M. Schuijt, Chantal K.E. van Drimmelen, Laura L. Buijse, Dailing Wu, Marie‐Claire Boerwinkel, Dick J.M. Belgers, +7 more
12citations -
DNA metabarcoding illuminates the contribution of small and very small prey taxa to the diet of lions2023 Environmental DNA article Environmental Science Environmental DNA in Biodiversity Studies Open access
Kevin Groen, Sophie Beekenkamp, Hans H. de Iongh, Francis Lesilau, Mumbi Chege, Luka Narisha, +3 more
9citations -
Environmental DNA Metabarcoding Effectively Detects Invasive Species, Pests, and Community Changes in Taiwan's Rice Fields2026 Ecology and Evolution article Environmental Science Environmental DNA in Biodiversity Studies Open access
Pritam Banerjee, Gobinda Dey, Kathryn A. Stewart, Matthew A. Barnes, Md. Taharia, Mathew Seymour, +4 more
3citations -
Environmental DNA Metabarcoding Effectively Detects Invasive Species, Pests, and Community Changes in Taiwan’s Rice Fields2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Environmental DNA in Biodiversity Studies Open access
Pritam Banerjee, Gobinda Dey, Kathryn A. Stewart, Matthew A. Barnes, Md. Taharia, Mathew Seymour, +4 more
0citations -
Proficiency testing and cross-laboratory method comparison to support standardisation of diatom DNA metabarcoding for freshwater biomonitoring2025 Metabarcoding and Metagenomics article Environmental Science Environmental DNA in Biodiversity Studies Open access
Valentin Vasselon, Sinziana F. Rivera, Éva Ács, Salomé F.P. Almeida, Karl Blyth Andree, Laure Apothéloz‐Perret‐Gentil, +34 more
18citations -
Metabarcoding reveals different zooplankton communities in northern and southern areas of the North Sea2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Environmental DNA in Biodiversity Studies Open access
Jan‐Niklas Macher, Berry van der Hoorn, Katja T. C. A. Peijnenburg, Lodewijk van Walraven, Willem Renema
12citations -
The Fellowship of the Ring Test: DNAqua-Net WG2 initiative to compare diatom metabarcoding protocols used in routine freshwater biomonitoring for standardisation2021 ARPHA Conference Abstracts conference-paper Environmental Science Environmental DNA in Biodiversity Studies Open access
Valentin Vasselon, Éva Ács, Salomé F.P. Almeida, Karl Blyth Andree, Laure Apothéloz‐Perret‐Gentil, Bonnie Bailet, +34 more
8citations -
Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna2024 Molecular Ecology Resources article Environmental Science Environmental DNA in Biodiversity Studies Open access
Jan‐Niklas Macher, Alejandro Martínez, Sude Çakir, Pierre‐Etienne Cholley, Eleni Christoforou, Marco Curini Galletti, +11 more
22citations -
Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: a case study on beach meiofauna2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Environmental DNA in Biodiversity Studies Open access
Jan‐Niklas Macher, Alejandro Martínez, Sude Çakir, Pierre‐Etienne Cholley, Eleni Christoforou, Marco Curini Galletti, +11 more
3citations -
Best practices in metabarcoding of fungi: From experimental design to results2022 Molecular Ecology article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access
Leho Tedersoo, Mohammad Bahram, Lucie Zinger, R. Henrik Nilsson, Peter Gault Kennedy, Teng Yang, +2 more
345citations -
Metacommunity Theory and Metabarcoding Reveal the Environmental, Spatial and Biotic Drivers of Meiofaunal Communities in Sandy Beaches2025 Molecular Ecology article Earth and Planetary Sciences Marine Biology and Ecology Research Open access
Jan-Niklas Macher, Maximilian Pichler, Simon Creer, Alejandro Martínez, Diego Fontaneto, Willem Renema
14citations -
Metacommunity theory and metabarcoding reveal the environmental, spatial, and biotic drivers of meiofaunal communities in sandy beaches2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Earth and Planetary Sciences Marine Biology and Ecology Research Open access
Jan‐Niklas Macher, Maximilian Pichler, Simon Creer, Alejandro Martínez, Diego Fontaneto, Willem Renema
5citations -
Environmental DNA metabarcoding reveals comparable responses to agricultural stressors on different trophic levels of a freshwater community2021 Molecular Ecology article Environmental Science Environmental DNA in Biodiversity Studies Open access
Kevin K. Beentjes, S. Henrik Barmentlo, Ellen Cieraad, Menno Schilthuizen, Berry van der Hoorn, Arjen G. C. L. Speksnijder, +1 more
21citations -
Comparing eDNA metabarcoding with morphological analyses: Fungal species richness and community composition of differently managed stages along a forest conversion of Norway spruce towards European beech in Germany2021 Forest Ecology and Management article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions
Peggy Heine, Jonas Hausen, Richard Ottermanns, Martina Roß‐Nickoll
13citations -
Corrigendum to “Comparing eDNA metabarcoding with morphological analyses: Fungal species richness and community composition of differently managed stages along a forest conversion of Norway spruce towards European beech in Germany” [For. Ecol. Manage. 496 (2021) 119429]2021 Forest Ecology and Management erratum Environmental Science Environmental DNA in Biodiversity Studies
Peggy Heine, Jonas Hausen, Richard Ottermanns, Martina Roß‐Nickoll
0citations -
Metabarcoding reveals that bacterial and fungal microbiomes are perturbed by micropollutants in a fjord system (Hakefjorden and Askeröfjorden) at the Swedish west coast2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Microbial Community Ecology and Physiology Open access
Eduardo Acosta, Nicolai Verbücheln, Sonja Schaufelberger, R. Henrik Nilsson, Werner Brack, Alexis Fonseca, +2 more
1citations -
Bacterial and fungal metabarcoding data characterizing within-canopy and within-leaf microbiota variations of three beech trees (Fagus Sylvatica) and their surrounding environment during the vegetative season of 2017.2022 Harvard Dataverse dataset Environmental Science Microbial Community Ecology and Physiology Open access
Tania Fort, Charlie Pauvert, Émilie Chancerel, Régis Burlett, Lisa Wingate, Corinne Vacher
0citations -
Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods2022 GigaScience article Environmental Science Environmental DNA in Biodiversity Studies Open access
Paula Arribas, Carmelo Andújar, Kristine Bohmann, Jeremy R deWaard, Evan P. Economo, Vasco Elbrecht, +13 more
26citations