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Aggregate data modelling: a fast implementation for fitting pharmacometrics models to summary-level data in R2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Mathematics Statistical Methods in Clinical Trials Open access
Hidde van de Beek, Pyry A. J. Välitalo, J. G. Coen van Hasselt, Laura B. Zwep
0citations -
Overcoming the Reproducibility Crisis - Results of the first Community Survey of the German National Research Data Infrastructure for Neuroscience2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Research Data Management Practices Open access
Carsten M. Klingner, Michael Denker, Sonja Grün, Michael Hanke, Steffen Oeltze‐Jafra, Frank W. Ohl, +7 more
3citations -
The Open Field test as a tool for behavior analysis in pigs - is a standardization of setup necessary? A systematic review2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Veterinary Animal Behavior and Welfare Studies Open access
Mareike Schulz, Leonie Zieglowski, Marcin Kopaczka, Rene Hany Tolba
1citations -
FERMO: a Dashboard for Automated Prioritization of Molecular Features from Mass Spectral Data2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Mitja M. Zdouc, Hannah E. Augustijn, Nataliia V. Machushynets, Lina M. Bayona, Sylvia Soldatou, Niek De Jonge, +5 more
17citations -
CDE-Mapper: Using Retrieval-Augmented Language Models for Linking Clinical Data Elements to Controlled Vocabularies2025 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Komal Gilani, Marlo Verket, Michel J. Dumontier, Hans‐Peter Brunner‐La Rocca, Visara Urovi
0citations -
FLAG-X: Hybrid machine learning workflows for automated gating of clinical flow cytometry data2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Paul Martini, Marziyeh Mohammadi, Michael Christoph Thrun, David B. Blumenthal, Stefan W. Krause
0citations -
From exact gradients to exact standard errors: third-order sensitivity equations for the FOCE and FOCEI population likelihood2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Mathematics Statistical Methods and Bayesian Inference Open access
Hidde van de Beek, Massinissa Beldjenna, Matthew L. Fidler, Laura B. Zwep, J. G. Coen van Hasselt
0citations -
SwarmMAP: Swarm Learning for Decentralized Cell Type Annotation in Single Cell Sequencing Data2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Oliver Lester Saldanha, Vivien Goepp, Hyojin Kim, Jie Ping Zhu, Rafael Kramann, Sikander Hayat, +1 more
1citations -
Robust support for semi-automated reductions of Keck/NIRSPEC data using PypeIt2024 arXiv (Cornell University) preprint Physics and Astronomy Astronomy and Astrophysical Research Open access
Adolfo S. Carvalho, Greg Doppmann, Kyle B. Westfall, Debora Pelliccia, Jason Xavier Prochaska, Joseph F. Hennawi, +4 more
0citations