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IFABP levels predict visceral malperfusion in the first hours after open thoracoabdominal aortic repair2023 Frontiers in Cardiovascular Medicine article Medicine Abdominal vascular conditions and treatments Open access
Panagiotis Doukas, Cathryn Bassett, Hanif Krabbe, Jelle Frankort, Michael Johan Jacobs, Moustafa Elfeky, +1 more
7citations -
Doing More with Less: Accurate and Scalable Ligand Free Energy Calculations by Focusing on the Binding Site2026 Journal of Chemical Information and Modeling article Computer Science Computational Drug Discovery Methods Open access
David Alencar Araripe, Alejandro Díaz‐Holguín, Antti Poso, Gerard J. P. van Westen, Johan Åqvist, Hugo Gutiérrez‐de‐Terán, +1 more
3citations -
An Enhanced Sampling Approach to the Induced Fit Docking Problem in Protein-Ligand Binding: the case of mono-ADP-ribosylation hydrolases inhibitors2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Qianqian Zhao, Riccardo Capelli, Paolo Carloni, Bernhard Lüscher, Jinyu Li, Giulia Rossetti
1citations -
Enhanced Sampling Approach to the Induced-Fit Docking Problem in Protein–Ligand Binding: The Case of Mono-ADP-Ribosylation Hydrolase Inhibitors2021 Journal of Chemical Theory and Computation article Computer Science Computational Drug Discovery Methods Open access
Qianqian Zhao, Riccardo Capelli, Paolo Carloni, Bernhard Lüscher, Jinyu Li, Giulia Rossetti
28citations -
LogoMotif: a comprehensive database of transcription factor binding site profiles in Actinobacteria2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Microbial Natural Products and Biosynthesis Open access
Hannah E. Augustijn, Dimitris Karapliafis, K. Joosten, Sébastien Rigali, Gilles P. van Wezel, Marnix H. Medema
3citations -
LogoMotif: A Comprehensive Database of Transcription Factor Binding Site Profiles in Actinobacteria2024 Journal of Molecular Biology article Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Hannah E. Augustijn, Dimitris Karapliafis, K. Joosten, Sébastien Rigali, Gilles P. van Wezel, Marnix H. Medema
20citations -
Prediction models for hormone receptor status in female breast cancer do not extend to males: further evidence of sex-based disparity in breast cancer
Subarnarekha Chatterji, Marko van Treeck, Chiara Maria Lavinia Loeffler, Oliver Lester Saldanha, Gregory Patrick Veldhuizen, Didem Çifçi, +4 more
8citations -
Fine tuning of long-range interactions to describe the binding of adamantane and diamantane derivatives to a Cucurbit[7]uril-based synthetic receptor: Insights from metadynamics simulations2025 The Journal of Chemical Physics article Chemistry Supramolecular Chemistry and Complexes Open access
Amal Vijay, Giacomo Salvadori, Frank Biedermann, Giulia Rossetti, Paolo Carloni, Davide Mandelli
0citations -
Cord blood levels of insulin‐like growth factor‐1 and insulin‐like growth factor binding protein‐3 correlate with perinatal brain development in fetal congenital heart disease2025 Ultrasound in Obstetrics and Gynecology article Medicine Congenital Heart Disease Studies Open access
Maaike Nijman, Nathalie H.P. Claessens, Johannes M. P. J. Breur, Lieke Reijn, Nicolaas J. G. Jansen, Inge M van Ooijen, +6 more
2citations -
PTX3 structure determination using a hybrid cryoelectron microscopy and AlphaFold approach offers insights into ligand binding and complement activation2022 Proceedings of the National Academy of Sciences article Immunology and Microbiology Biomarkers in Disease Mechanisms Open access
Dylan P. Noone, Douwe J. Dijkstra, Teun T. van der Klugt, Peter A. van Veelen, Arnoud H. de Ru, Paul J. Hensbergen, +2 more
45citations -
Association Between Low Sex Hormone–Binding Globulin and Increased Risk of Type 2 Diabetes Is Mediated by Increased Visceral and Liver Fat: Results From Observational and Mendelian Randomization Analyses
Theresa A Stangl, Chantal Maria Wiepjes, Roelof A. J. Smit, Astrid van Hylckama Vlieg, Hildo J. Lamb, Jeroen H. P. M. van der Velde, +7 more
17citations -
Mutated DNMT3A creates a public HLADQ- binding neoantigen on acute myeloid leukemia2025 Frontiers in Immunology article Immunology and Microbiology Immunotherapy and Immune Responses Open access
Dyantha I. van der Lee, Eva M. Argiro, Sebastiaan N. J. Laan, M. Willy Honders, Rob C. M. de Jong, Nadine Struckman, +2 more
3citations -
Binding pose depth modulates photoswitchable ligands’ efficacy at the 5-HT2A receptor2026 Communications Chemistry article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Verena Weber, Giacomo Salvadori, Federico Natale, Hubert Gerwe, Michael W. Decker, Paolo Carloni, +1 more
0citations -
Binding pose depth modulates photoswitchable ligands’ efficacy at the 5-HT2A receptor2026 Communications Chemistry article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Verena Weber, Giacomo Salvadori, Federico Natale, Hubert Gerwe, Michael W. Decker, Paolo Carloni, +1 more
0citations