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Dealing with transcription-blocking DNA damage: Repair mechanisms, RNA polymerase II processing and human disorders2021 DNA repair article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Nan Jia, Chaowan Guo, Yuka Nakazawa, Diana van den Heuvel, Martijn S. Luijsterburg, Tomoo Ogi
51citations -
HPF1-dependent histone ADP-ribosylation triggers chromatin relaxation to promote the recruitment of repair factors at sites of DNA damage2023 Nature Structural & Molecular Biology article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Rebecca Smith, Siham Zentout, Magdalena B. Rother, Nicolas Bigot, Catherine Chapuis, Alexandra Mihuț, +5 more
77citations -
Evaluation of Proton-Induced DNA Damage in 3D-Engineered Glioblastoma Microenvironments2022 ACS Applied Materials & Interfaces article Medicine Radiation Therapy and Dosimetry Open access cited by 3 patents
Qais Akolawala, Marta Rovituso, Henri H. Versteeg, Araci M. R. Rondon, Angelo Accardo
38citations -
PAF1C restores transcription after DNA damage independently of promoting histone mark deposition2026 EMBO Reports article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Janne J. M. van Schie, Bram A F J de Groot, Diana van den Heuvel, Martijn S. Luijsterburg
2citations -
A CSB-PAF1C axis restores processive transcription elongation after DNA damage repair2021 Nature Communications article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Diana van den Heuvel, Cornelia G. Spruijt, Román González‐Prieto, Michelle T. Paulsen, Di Zhou, Haoyu Wu, +10 more
69citations -
PHF2 regulates homology-directed DNA repair by controlling the resection of DNA double strand breaks2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Ignacio Alonso‐de Vega, Maria Cristina Paz‐Cabrera, Magdalena B. Rother, Wouter W. Wiegant, Cintia Checa-Rodríguez, Juan Ramon Hernandez-Fernaud, +4 more
35citations -
DNA damage independent inhibition of NF-κB transcription by anthracyclines2022 eLife article Biochemistry, Genetics and Molecular Biology NF-κB Signaling Pathways Open access
Ângelo Ferreira Chora, Dora C. S. Pedroso, Eleni Kyriakou, Nadja Pejanovic, Henrique G. Colaço, Raffaella Gozzelino, +20 more
16citations -
Clearance of DNA damage-arrested RNAPII is selectively impaired in Cockayne syndrome cells2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Paula J. van der Meer, George Yakoub, Yuka Nakazawa, Tomoo Ogi, Martijn S. Luijsterburg
8citations -
A CSB-PAF1C axis restores processive transcription elongation after DNA damage repair2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Diana van den Heuvel, Cornelia G. Spruijt, Román González‐Prieto, Michelle T. Paulsen, Di Zhou, Haoyu Wu, +10 more
5citations -
Transcriptomic mapping of the inter-individual variability of cellular stress response activation in primary human hepatocytes2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Marije Niemeijer, Witold Więcek, Suzanna Huppelschoten, Peter Bouwman, Audrey Baze, Celine Parmentier, +4 more
3citations -
DNA damage independent inhibition of NF-κB transcription by anthracyclines2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology NF-κB Signaling Pathways Open access
Ângelo Ferreira Chora, Dora C. S. Pedroso, Eleni Kyriakou, Nadja Pejanovic, Henrique G. Colaço, Raffaella Gozzelino, +20 more
2citations -
DNA methylation-based age acceleration observed in IDH wild-type glioblastoma is associated with better outcome—including in elderly patients2022 Acta Neuropathologica Communications article Medicine Glioma Diagnosis and Treatment Open access
Pierre Bady, Christine Marosi, Michael Weller, Bjørn Henning Grønberg, Henrik Schultz, MARTIN J.B. TAPHOORN, +6 more
16citations -
Quantitative phosphoproteomics to unravel the cellular response to chemical stressors with different modes of action2020 Archives of Toxicology article Chemistry Advanced Proteomics Techniques and Applications Open access
Bharath K. Sampadi, Alex Pines, Stephanie Munk, Branislav Mišovic, Anton J.L. de Groot, Bob van de Water, +3 more
17citations -
Systematic transcriptome-based comparison of cellular adaptive stress response activation networks in hepatic stem cell-derived progeny and primary human hepatocytes2021 Toxicology in Vitro article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Bas ter Braak, Marije Niemeijer, Ruben Boon, Celine Parmentier, Audrey Baze, Lysiane Richert, +4 more
14citations -
The integrated stress response‐related expression of CHOP due to mitochondrial toxicity is a warning sign for DILI liability2024 Liver International article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Matthijs Vlasveld, Giulia Callegaro, Ciaran P. Fisher, Julie A. Eakins, PAUL A. WALKER, Samantha Lok, +6 more
7citations -
Integration of temporal single cell cellular stress response activity with logic-ODE modeling reveals activation of ATF4-CHOP axis as a critical predictor of drug-induced liver injury2021 Biochemical Pharmacology article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Lukas S. Wijaya, Panuwat Trairatphisan, Attila Gábor, Marije Niemeijer, Jason Keet, Ariadna Alcalà Morera, +13 more
27citations -
Effective Radiosensitization of Bladder Cancer Cells by Pharmacological Inhibition of DNA-PK and ATR2022 Biomedicines article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Ahmed A Chughtai, Julia Pannhausen, Pia Dinger, Julia Wirtz, Ruth Knüchel, Nadine Therese Gaisa, +2 more
13citations -
Pleuroparenchymal fibroelastosis in a monogenic mitochondrial DNA depletion syndrome2026 European Respiratory Journal article Medicine Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis Open access
Sandra von Hardenberg, Pia Maier, Leonard Christian, Anibh Martin Das, Lavinia Neubert, Jannik Ruwisch, +22 more
0citations -
Inhibition of SUMOylation enhances DNA hypomethylating drug efficacy to reduce outgrowth of hematopoietic malignancies2023 Leukemia article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access cited by 2 patents
Jessie S. Kroonen, Ilona J. de Graaf, Sumit Kumar, Dennis F.G. Remst, Anne K. Wouters, Mirjam H.M. Heemskerk, +1 more
22citations -
Editorial: Protecting the code: DNA double-strand break repair pathway choice2022 Frontiers in Genetics editorial Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Jenny Kaur Singh, Sylvie M. Noordermeer, Judit Jiménez-Sáinz, David G. Maranon, Matthias Altmeyer
2citations -
Poly(ADP-ribosyl)ation temporally confines SUMO-dependent ataxin-3 recruitment to control DNA double-strand break repair2021 Journal of Cell Science article Biochemistry, Genetics and Molecular Biology DNA Repair Mechanisms Open access
Annika Pfeiffer, Laura K. Herzog, Martijn S. Luijsterburg, Rashmi G. Shah, Magdalena B. Rother, Henriette Stoy, +4 more
10citations -
DNA-dependent binding of nargenicin to DnaE1 inhibits replication in Mycobacterium tuberculosis2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Tuberculosis Research and Epidemiology Open access
Melissa Dalcina Chengalroyen, Mandy K. Mason, Alessandro Borsellini, R. Tassoni, Garth L. Abrahams, Sasha L. Lynch, +10 more
2citations -
Deciphering the Specificity of Reversible DNA-Phosphate ADP-Ribosylation via the Precise Synthesis and Enzymatic Profiling of Nucleotide-Phospho-ADP-Ribosyl Probes2026 Journal of the American Chemical Society article Biochemistry, Genetics and Molecular Biology DNA and Nucleic Acid Chemistry
Yang Lu, Zongxing Yu, Li Tang, Y N Wu, Jim Voorneveld, Waghela Deeksha, +3 more
0citations