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Cell type matching across species using protein embeddings and transfer learning2023 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Kirti Biharie, Lieke Michielsen, Marcel J. T. Reinders, Ahmed Essam Mahfouz
0citations -
Cell type matching across species using protein embeddings and transfer learning2024 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Kirti Biharie, Lieke Michielsen, Marcel J. T. Reinders, Ahmed Essam Mahfouz
0citations -
Immunomodulatory endothelial cells contribute to T cell recruitment and activation through antigen presentation on MHC class II2026 dissertation Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Matteo Cartura, Blerina Aliraj, Witold G. Szymanski, Giulio Ferrario, Flávia Rezende, Beyza Güven, +11 more
1citations -
ETV2 Upregulation Marks the Specification of Early Cardiomyocytes and Endothelial Cells During Co-differentiation2022 Stem Cells article Biochemistry, Genetics and Molecular Biology Pluripotent Stem Cells Research Open access
Xu Cao, Maria Mircea, Gopala Krishna Yakala, Francijna E. van den Hil, Marcella Brescia, Hailiang Mei, +3 more
4citations -
The development of the amnion in mice and other amniotes2022 Philosophical Transactions of the Royal Society B Biological Sciences article Biochemistry, Genetics and Molecular Biology Developmental Biology and Gene Regulation Open access cited by 1 patent
Susana M. Chuva de Sousa Lopes, Bernard A.J. Roelen, Kirstie A. Lawson, An Zwijsen
32citations -
Circuit topology analysis of cellular genome reveals signature motifs, conformational heterogeneity, and scaling2022 iScience article Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Barbara Scalvini, Helmut Schießel, Anatoly Golovnev, Alireza Mashaghi
9citations -
Morphoelectric Diversity and Specialization of Neuronal Cell Types in the Primate Striatum2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Xiao-Ping Liu, Rachel A. Dalley, Nelson Johansen, Agata Budzillo, Julian Thijssen, Jeremy A. Miller, +86 more
2citations -
Genomic analysis defines clonal relationships of ductal carcinoma in situ and recurrent invasive breast cancer2022 Nature Genetics article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Esther H. Lips, Tapsi Kumar, Anargyros Megalios, Lindy L. Visser, Michael Sheinman, Angelo Fortunato, +51 more
98citations -
Multi-ancestry genome-wide study in >2.5 million individuals reveals heterogeneity in mechanistic pathways of type 2 diabetes and complications2023 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Ken Suzuki, Konstantinos Hatzikotoulas, Lorraine Southam, Henry J. Taylor, Xianyong Yin, Kim Lorenz, +93 more
21citations -
Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression2021 Nature Genetics article Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access cited by 2 patents
Urmo Võsa, Annique Claringbould, Harm-Jan Westra, Marc Jan Bonder, Patrick Deelen, Biao Zeng, +88 more
2,569citations -
Serum proteomics of adults with acute liver failure provides mechanistic insights and attractive prognostic biomarkers2025 JHEP Reports article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Katharina Remih, Franziska-Maria Hufnagel, Anna Sophie Karl, Valerie L. Durkalski‐Mauldin, William M. Lee, Constantine Jason Karvellas, +14 more
5citations -
Assembly and Quantification of Co-Cultures Combining Heterotrophic Yeast with Phototrophic Sugar-Secreting Cyanobacteria2024 Journal of Visualized Experiments article Energy Algal biology and biofuel production Open access
Dennis Hasenklever, Joana Charlot Pohlentz, Tom Berwanger, Emmanuel J. Kokarakis, Tanvir Hassan, Kerstin Schipper, +3 more
0citations -
The Stroma Liquid Biopsy Panel Contains a Stromal-Epithelial Gene Signature Ratio That Is Associated with the Histologic Tumor-Stroma Ratio and Predicts Survival in Colon Cancer2021 Cancers article Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Cor J. Ravensbergen, Matthew Kuruc, Meaghan Polack, Stijn Crobach, Hein Putter, Hans A. J. Gelderblom, +3 more
12citations -
Analysis of cancer-associated glycosyltransferases reveals novel targets of non-small cell lung cancer pathogenesis2025 Frontiers in Oncology article Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Chang Liu, Thomas van Ee, Jurriaan Janssen, Ernesto Rodríguez, Yongsoo Kim, Teodora Radonic, +4 more
4citations