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The Interplay between Gut Microbiota and Diet-Induced Kidney Protection2026 Kidney360 article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Francisco Lopes, Daniel Martínez‐Martínez, Martin Richard Späth, Karla Johanna Ruth Hoyer-Allo, Sebastian Strubl, Sadrija Cukoski, +12 more
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#4547 IDENTIFICATION OF GLYCOSYLATED IGF2 IN HUMAN URINARY PEPTIDOME AND ITS ASSOCIATION WITH CKD2023 Nephrology Dialysis Transplantation article Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Sonnal Lohia, Agnieszka Latosińska, Jérôme Zoidakis, Manousos Makridakis, Harald Mischak, Griet Glorieux, +2 more
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Systematic comparison of temporal hepatotoxicant-induced gene network responses across 3 liver test systems2026 Toxicological Sciences article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access
Tamara Y Danilyuk, Marou Schouten, Elsje J Burgers, Barira Islam, Joost B. Beltman, Peter Bouwman, +2 more
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Heterogenous microglial reactivity contrasts with stable vascular transcriptional programs in mouse models of Alzheimer’s, CADASIL, and Traumatic Brain Injury2026 Nature Communications article Neuroscience Neuroinflammation and Neurodegeneration Mechanisms Open access
Katrine Dahl Bjørnholm, H. Li, G. Mocci, W. Shao, E. Baldisseri, S. B. Rao, +17 more
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Consistent changes in global gene expression patterns despite strong variation in individual gene expression in the male mouse hippocampus following early life stress
Jeniffer Sanguino‐Gómez, Jacobus C. Buurstede, Eduardo Henrique de Lima Umeoka, Marcia Santos da Silva Umeoka, Max Gentenaar, Norberto Garcia‐Cairasco, +6 more
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Analytical choices drive toxicogenomic potency estimates: a systematic evaluation of transcriptomic points of departure2026 Toxicological Sciences article Biochemistry, Genetics and Molecular Biology Carcinogens and Genotoxicity Assessment Open access
Imke B. Bruns, Dayna R. Schultz, Emmanuel Demuynck, Friedel Dewulf, Ioannis Theologidis, Steven J. Kunnen, +12 more
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The local cellular response to Human Papillomavirus focuses on basal layer restoration as visualized in situ by specific cellular neighborhoods near infected cells
Roderick C. Slieker, Ziena Abdulrahman, Saskia J A M Santegoets, Mariëtte I.E. van Poelgeest, Marij J.P. Welters, Sjoerd H. van der Burg
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Trefoil Factor‐3 Is a Hypoxia‐Triggered Pro‐Tumorigenic Factor in Hepatoblastoma2026 Liver International article Medicine Hepatocellular Carcinoma Treatment and Prognosis Open access
Luz Andrea Martínez‐Pérez, M. Ujue Latasa, Iker Uriarte, Amaya López-Pascual, Jasmin Elurbide, Pavel Strnad, +19 more
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Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches2022 Cell article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 4 patents
Martin Guilliams, Johnny Bonnardel, Birthe Haest, Bart Vanderborght, Camille Wagner, Anneleen Remmerie, +31 more
1,021citations -
Causal integration of multi‐omics data with prior knowledge to generate mechanistic hypotheses2021 Molecular Systems Biology article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Aurélien J. F. Dugourd, Christoph Kuppe, Marco Sciacovelli, Enio Gjerga, Attila Gábor, Kristina Bennet Emdal, +12 more
156citations -
Multi-Omic analyses characterize the ceramide/sphingomyelin pathway as a therapeutic target in Alzheimer’s disease2022 Communications Biology article Biochemistry, Genetics and Molecular Biology Sphingolipid Metabolism and Signaling Open access cited by 1 patent
Priyanka Baloni, Matthias Arnold, Luna Buitrago, Kwangsik T. Nho, Herman Moreno, Kevin Huynh, +47 more
114citations -
Spatial transcriptomic characterization of pathologic niches in IPF2024 Science Advances article Medicine Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis Open access cited by 1 patent
Christoph H. Mayr, Diana Santacruz, Sebastian Jarosch, Marina Bleck, Angela McNabola, Charlotte Lempp, +11 more
106citations -
Intersecting single-cell transcriptomics and genome-wide association studies identifies crucial cell populations and candidate genes for atherosclerosis2021 European Heart Journal Open article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Lotte Slenders, Lennart P. L. Landsmeer, Kai Cui, Marie A.C. Depuydt, Maarten C. Verwer, Joost M. Mekke, +17 more
77citations -
Consensus Transcriptional Landscape of Human End‐Stage Heart Failure2021 Journal of the American Heart Association article Medicine Cardiac Fibrosis and Remodeling Open access
Ricardo O. Ramirez Flores, Jan D. Lanzer, Christian H. Holland, Florian Leuschner, Patrick Most, Jobst‐Hendrik Schultz, +2 more
73citations -
Mitochondrial gene signature in the prefrontal cortex for differential susceptibility to chronic stress2020 Scientific Reports article Biochemistry, Genetics and Molecular Biology Mitochondrial Function and Pathology Open access
Meltem Weger, Daniel Alpern, Antoine Cherix, Sriparna Ghosal, Jocelyn Grosse, Julie Russeil, +4 more
71citations -
Functional genomics analysis identifies T and NK cell activation as a driver of epigenetic clock progression2022 Genome biology article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access cited by 1 patent
Thomas H. Jonkman, Koen F. Dekkers, Roderick C. Slieker, Crystal D. Grant, M. Arfan Ikram, Marleen M. J. van Greevenbroek, +5 more
71citations -
CD4+ T cells produce IFN-I to license cDC1s for induction of cytotoxic T-cell activity in human tumors2024 Cellular and Molecular Immunology article Immunology and Microbiology Immunotherapy and Immune Responses Open access
Xin Lei, Daniël de Groot, Marij J.P. Welters, Tom de Wit, Ellen Schrama, Hans van Eenennaam, +10 more
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