Papers matching “protein structure visualization” 67
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Protein Circuit Topology PyMOL Plugin v0.0.32026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Matiss Dimins, Alexander Bazba, Adam Mogyorosi, Ella Kennon, Tomas Diaz Fiol, Lise Hagen, +3 more
0citations -
iFeatureOmega: an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets2022 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Zhen Chen, Xuhan Liu, Pei Zhao, Chen Li, Yanan Wang, Fuyi Li, +7 more
102citations -
Additional file 1 of Genolator enables protein function interpretation using a multimodal large language model fusing genomic and structural interpretation with natural language interaction2026 Figshare article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Martin Danner, Tanhim Islam, Matthias Begemann, Florian Kraft, Miriam Elbracht, Ingo Kurth, +1 more
0citations -
Additional file 1 of Genolator enables protein function interpretation using a multimodal large language model fusing genomic and structural interpretation with natural language interaction2026 Figshare article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Martin Danner, Tanhim Islam, Matthias Begemann, Florian Kraft, Miriam Elbracht, Ingo Kurth, +1 more
0citations -
Release artefacts for Protein Circuit Topology PyMOL Plugin v0.0.32026 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Matiss Dimins, Alexander Bazba, Adam Mogyorosi, Ella Kennon, Tomas Diaz Fiol, Lise Hagen, +2 more
0citations -
Protein Circuit Topology PyMOL Plugin v0.0.42026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Matiss Dimins, Alexander Bazba, Adam Mogyorosi, Ella Kennon, Tomas Diaz Fiol, Lise Hagen, +3 more
0citations -
Protein Circuit Topology PyMOL Plugin v0.0.22026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Matiss Dimins, Alexander Bazba, Adam Mogyorosi, Ella Kennon, Tomas Diaz Fiol, Lise Hagen, +3 more
0citations -
Protein Circuit Topology PyMOL Plugin v0.0.22026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Matiss Dimins, Alexander Bazba, Adam Mogyorosi, Ella Kennon, Tomas Diaz Fiol, Lise Hagen, +3 more
0citations -
Protein Circuit Topology PyMOL Plugin v0.0.32026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Matiss Dimins, Alexander Bazba, Adam Mogyorosi, Ella Kennon, Tomas Diaz Fiol, Lise Hagen, +3 more
0citations -
Release artefacts for Protein Circuit Topology PyMOL Plugin v0.0.42026 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Matiss Dimins, Alexander Bazba, Adam Mogyorosi, Ella Kennon, Tomas Diaz Fiol, Lise Hagen, +2 more
0citations -
ProteinCT: An implementation of the protein circuit topology framework2022 MethodsX article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Duane Moes, Seyedeh Elnaz Banijamali, Vahid Sheikhhassani, Barbara Scalvini, Jaie C. Woodard, Alireza Mashaghi
7citations -
Hybrid MM/CG Webserver: Automatic Set Up of Molecular Mechanics/Coarse-Grained Simulations for Human G Protein-Coupled Receptor/Ligand Complexes2020 Frontiers in Molecular Biosciences article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Jakob Schneider, Rui Pedro Ribeiro, Mercedes Alfonso‐Prieto, Paolo Carloni, Alejandro Giorgetti
9citations -
DNET: A Graph-Based Tool and Workflow for Dynamic Hydrogen-Bond Networks and Applications for Visual Rhodopsins2026 Journal of Chemical Theory and Computation article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling
Éva Bertalan, Matthew J. Rodrigues, Gebhard F. X. Schertler, Bondar Ana-Nicoleta
2citations -
A solid beta-sheet structure is formed at the surface of FUS liquid droplets during aging2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Amyotrophic Lateral Sclerosis Research Open access
Leonidas Emmanouilidis, Ettore Bartalucci, Yelena Kan, Mahdiye Ijavi, Maria Escura Pérez, Pavel Afanasyev, +7 more
13citations -
Impact of the Membrane Structure of the Stationary Phase on Steric Exclusion Chromatography (SXC) of Lentiviral Vectors2023 Membranes article Biochemistry, Genetics and Molecular Biology Protein purification and stability Open access
Jennifer J. Labisch, G. Philip Wiese, Karl B. Pflanz, John Linkhorst
2citations -
Phosphorylated peptide of G protein-coupled receptor induces dimerization in activated arrestin2020 Scientific Reports article Biochemistry, Genetics and Molecular Biology Receptor Mechanisms and Signaling Open access
Andreas Maximilian Stadler, Joachim Granzin, Anneliese Cousin, Renu Batra
2citations