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FiLiP: A python software development kit (SDK) for accelerating the development of services based on FIWARE IoT platform2024 The Journal of Open Source Software article Computer Science IoT and Edge/Fog Computing Open access
Thomas Storek, Junsong Du, Sebastian Blechmann, Rita Streblow, Dirk Müller
3citations -
LiberTEM: Software platform for scalable multidimensional data processing in transmission electron microscopy2020 The Journal of Open Source Software article Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access
Alexander Clausen, Dieter Weber, Karina Ruzaeva, Vadim Migunov, Anand Baburajan, Abijith Bahuleyan, +6 more
54citations -
A configurable software platform for creating, reviewing and adjudicating annotation of unstructured text.2022 International Journal for Population Data Science article Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Richard J Beare, Tanya Ravipati, Elizabeth Le, Taya Annabelle Collyer, Velandai K. Srikanth, Nadine E. Andrew
0citations -
The CCP 4 suite: integrative software for macromolecular crystallography2023 Acta Crystallographica Section D Structural Biology article Materials Science Enzyme Structure and Function Open access cited by 3 patents
Jon Agirre, Mihaela Atanasova, Haroldas Bagdonas, Charles C. Ballard, Arnaud Baslé, James Beilsten‐Edmands, +86 more
919citations -
Methods Hub: A Community-Driven, Interactive Platform for Open-Source Computational Tools and Tutorials2026 Media and Communication article Decision Sciences Scientific Computing and Data Management Open access
Christina Viehmann, Johannes Kiesel, Arnim Bleier, Chung-hong Chan, Po-Chun Chang, Raniere Silva, +8 more
0citations -
The LOVD3 platform: efficient genome-wide sharing of genetic variants2021 European Journal of Human Genetics article Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Ivo F.A.C. Fokkema, Mark Kroon, J. Hernandez, Daan Asscheman, Ivar Lugtenburg, Jerry Hoogenboom, +1 more
157citations -
An open-source robust machine learning platform for real-time detection and classification of 2D material flakes2024 Machine Learning Science and Technology article Engineering Industrial Vision Systems and Defect Detection Open access
Jan-Lucas Uslu, Taoufiq Ouaj, David Tebbe, Jo Henri Bertram, Marc Schütte, Kenji Watanabe, +4 more
25citations -
iFeatureOmega: an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets2022 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Zhen Chen, Xuhan Liu, Pei Zhao, Chen Li, Yanan Wang, Fuyi Li, +7 more
102citations -
ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation2022 Journal of Structural Biology article Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access
J. Jiménez de la Morena, Pablo Conesa, Yunior C. Fonseca, F.P. de Isidro-Gómez, David Herreros, Estrella Fernández-Giménez, +24 more
50citations -
Requirements for a Collaborative and Efficient Scientific Software Support Architecture2026 Zenodo (CERN European Organization for Nuclear Research) article Decision Sciences Scientific Computing and Data Management Open access
Camilla Lüttgens, Andrea Balza Morales, Marc S. Boxberg, Marcel Nellesen, Paul R. Brenner, Marius Politze, +1 more
0citations -
Instrument–Software Synergy in Proteomics: Systematic Evaluation across Mass Spectrometry Platforms, Search Engines, and Rescoring Methods2026 Journal of Proteome Research article Chemistry Advanced Proteomics Techniques and Applications Open access
Sander Heyndrickx, Robbin Bouwmeester, Arthur Declercq, Robbe Devreese, Magnus Palmblad, Wout Bittremieux, +7 more
0citations -
Easy-MODA: Simplifying standardised registration of scientific simulation workflows through MODA template guidelines powered by the Enalos Cloud Platform2024 Computational and Structural Biotechnology Journal article Decision Sciences Scientific Computing and Data Management Open access
Panagiotis D. Kolokathis, Nikolaos K. Sidiropoulos, Dimitrios Zouraris, Dimitra‐Danai Varsou, Dimitris G. Mintis, Andreas Tsoumanis, +18 more
13citations -
The FAIR journey of a patient-driven registry: Reflections and practical solutions from the Duchenne Data Platform FAIRification experience2025 Journal of Neuromuscular Diseases article Computer Science Research Data Management Practices Open access
Nawel Lalout, Mark D. Wilkinson, Dagmar Wandrei, Adrian Tassoni, António Atalaia, Alberto Cámara Ballesteros, +11 more
1citations