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Does Schistosome or Malaria Exposure Contribute to Urban-Rural Differences in Vaccine Responses in Uganda? A Causal Mediation Analysis Using Data from Three Linked Randomised Controlled Trials2023 SSRN Electronic Journal preprint Immunology and Microbiology Parasites and Host Interactions Open access
Agnes Natukunda, Gyaviira Nkurunungi, Ludoviko Zirimenya, Jacent Nassuuna, Christopher Zziwa, Caroline Ninsiima, +15 more
1citations -
Semantic modelling of Common Data Elements for Rare Disease registries, and a prototype workflow for their deployment over registry data2021 medRxiv preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Rajaram Kaliyaperumal, Mark D. Wilkinson, Pablo Alarcón Moreno, Nirupama Benis, Ronald Cornet, Bruna dos Santos Vieira, +12 more
9citations -
Overcoming the Reproducibility Crisis - Results of the first Community Survey of the German National Research Data Infrastructure for Neuroscience2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Research Data Management Practices Open access
Carsten M. Klingner, Michael Denker, Sonja Grün, Michael Hanke, Steffen Oeltze‐Jafra, Frank W. Ohl, +7 more
3citations -
FERMO: a Dashboard for Automated Prioritization of Molecular Features from Mass Spectral Data2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Mitja M. Zdouc, Hannah E. Augustijn, Nataliia V. Machushynets, Lina M. Bayona, Sylvia Soldatou, Niek De Jonge, +5 more
17citations -
CDE-Mapper: Using Retrieval-Augmented Language Models for Linking Clinical Data Elements to Controlled Vocabularies2025 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Komal Gilani, Marlo Verket, Michel J. Dumontier, Hans‐Peter Brunner‐La Rocca, Visara Urovi
0citations -
scTopoGAN: unsupervised manifold alignment of single-cell data2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Akash Kumar Singh, Marcel J. T. Reinders, Ahmed Essam Mahfouz, Tamim Abdelaal
1citations -
Structural snapshots along K48-linked ubiquitin chain formation by the HECT E3 UBR52023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Ubiquitin and proteasome pathways Open access
Laura A. Hehl, Daniel Horn‐Ghetko, Jesuraj Rajan Prabu, Ronnald Vollrath, Duc Tung Vu, David A. Pérez Berrocal, +3 more
11citations -
Data-driven Product-Process Optimization of N-isopropylacrylamide Microgel Flow-Synthesis2023 arXiv (Cornell University) preprint Computer Science Advanced Multi-Objective Optimization Algorithms Open access
Luise F. Kaven, Artur M. Schweidtmann, Jana Israel, Nadja Wolter, Alexander Mitsos
0citations -
Understanding functional consequences of type 2 diabetes risk loci using the universal data integration and visualization R package CONQUER2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Gerard A. Bouland, Joline W. J. Beulens, Joey Nap, Arno R. van der Slik, Arnaud Zaldumbide, Leen M. ‘t Hart, +1 more
1citations -
Converting networks to predictive logic models from perturbation signalling data with CellNOpt2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access
Enio Gjerga, Panuwat Trairatphisan, Attila Gábor, Hermann Koch, Francesco Ceccarelli, Aurélien J. F. Dugourd, +2 more
4citations -
A causal perspective on Machine Learning for concrete quality predictions and data-driven mixture optimization2026 Zenodo (CERN European Organization for Nuclear Research) preprint Engineering Concrete and Cement Materials Research Open access
Thorsten Kalb, Anil Esen, Elsa Qoku, Thomas Matschei, Chiara Masiero, Gian Antonio Susto
0citations -
Multimodal analysis unveils tumor microenvironment heterogeneity linked to immune activity and evasion2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Óscar Lapuente-Santana, Gregor Sturm, Markus Außerhofer, Constantin Zackl, Maria Zopoglou, Nicholas McGranahan, +5 more
0citations