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Human cortical spheroids with a high diversity of innately developing brain cell types2023 Stem Cell Research & Therapy article Neuroscience Neurogenesis and neuroplasticity mechanisms Open access
Kim M. A. De Kleijn, Wieteke Ameliek Zuure, Kirsten R. Straasheijm, M. Cristina Avramut, Roman I. Koning, Gerard J.M. Martens
15citations -
A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain2021 Nature Communications article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access cited by 1 patent
Anoushka Joglekar, Andrey D. Prjibelski, Ahmed Essam Mahfouz, Paul G. Collier, Susan Lin, Anna Katharina Schlusche, +24 more
233citations -
Reference-based cell type matching of in situ image-based spatial transcriptomics data on primary visual cortex of mouse brain2023 Scientific Reports article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Yun Zhang, Jeremy A. Miller, Jeongbin Park, Boudewijn P. F. Lelieveldt, Brian Long, Tamim Abdelaal, +12 more
20citations -
A guide to the BRAIN Initiative Cell Census Network data ecosystem2023 PLoS Biology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Michael Hawrylycz, Maryann Elizabeth Martone, Giorgio A. Ascoli, Jan Gunnar Bjaalie, Hong‐Wei Dong, Satrajit Ghosh, +92 more
53citations -
Cell-type-specific and inflammatory DNA methylation patterns associated with PTSD2025 Brain Behavior and Immunity article Psychology Posttraumatic Stress Disorder Research Open access
Alicia K. Smith, Şeyma Katrinli, Adam X. Maihofer, Allison E. Aiello, Dewleen G. Baker, Marco P. Boks, +43 more
11citations -
An integrated single‐cell RNA ‐seq atlas of the mouse hypothalamic paraventricular nucleus links transcriptomic and functional types2024 Journal of Neuroendocrinology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Jari B. Berkhout, Delaram Poormoghadam, Chun‐Xia Yi, Andries Kalsbeek, Onno Cornelis Meijer, Ahmed Essam Mahfouz
38citations -
Tagged IDS causes efficient and engraftment-independent prevention of brain pathology during lentiviral gene therapy for Mucopolysaccharidosis type II2023 Molecular Therapy — Methods & Clinical Development article Medicine Lysosomal Storage Disorders Research Open access
Fabio Catalano, Eva C. Vlaar, Drosos Katsavelis, Zina Dammou, Jeroen C. van den Bosch, Marianne Hoogeveen‐Westerveld, +8 more
6citations -
Multiomics of iPSC‐derived ApoE3‐ and ApoE4 astrocytes and microglia uncovers cell type specific dysregulation of immunometabolism2023 Alzheimer s & Dementia article Medicine Alzheimer's disease research and treatments Open access
Rik van der Kant, Niek Blomberg, Lena Erlebach, Femke M. Feringa, Jorin Heijneman, Sascha Koppes, +11 more
1citations -
Transcriptional glucocorticoid effects in the brain: Finding the relevant target genes2022 Journal of Neuroendocrinology article Biochemistry, Genetics and Molecular Biology Estrogen and related hormone effects Open access
Onno Cornelis Meijer, Jacobus C. Buurstede, Eva M. G. Viho, Jorge Miguel Amaya, Anne-Sophie C A M Koning, Merel van der Meulen, +4 more
31citations -
The Cell Ontology in the age of single-cell omics2026 eScholarship (California Digital Library) article Biochemistry, Genetics and Molecular Biology Biomedical Text Mining and Ontologies Open access
Shawn Zheng Kai Tan, Aleix Puig-Barbe, Damien Goutte-Gattat, Caroline Eastwood, Brian D. Aevermann, Alida Avola, +29 more
7citations -
Pathway-centric visualization of cell-cell communication in single-cell transcriptomics data2026 npj Systems Biology and Applications article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Sidrah Maryam, Martin Manolov, Rafael Kramann, Sikander Hayat
0citations -
Decoding exon inclusion in the human brain reveals more divergent splicing mechanisms in neurons than glia2026 Genome biology article Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Lieke Michielsen, Justine Hsu, Anoushka Joglekar, Natan Belchikov, Marcel J. T. Reinders, Hagen Tilgner, +1 more
0citations -
Osimertinib Plasma Trough Concentration in Relation to Brain Metastases Development in Patients With Advanced EGFR-Mutated NSCLC2024 JTO Clinical and Research Reports article Medicine Lung Cancer Treatments and Mutations Open access
Judith L. Gulikers, G. Veerman, M. Jebbink, Paul D. Kruithof, Christi M. J. Steendam, René J. Boosman, +9 more
3citations -
Towards a Pseudo-Labeling Workflow for Celltype-Classification from Explanted Brain Slice Recordings2026 Current Directions in Biomedical Engineering article Neuroscience Neuroscience and Neural Engineering Open access
Cora Jostock, Jonas Ort, Henner Koch, Gregor Schiele, Andreas Erbslöh
0citations