Papers matching “transcriptomic data analysis” 278
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Utilizing rat kidney gene co-expression networks to enhance safety assessment biomarker identification and human translation2025 iScience article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Steven J. Kunnen, Giulia Callegaro, Jeffrey J. Sutherland, Panuwat Trairatphisan, Hugo W van Kessel, Lukas S. Wijaya, +11 more
7citations -
Utilizing gene co-expression networks with the rat kidney TXG-MAPr tool to enhance safety assessment, biomarker identification and human translation2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Steven J. Kunnen, Giulia Callegaro, Jeffrey J. Sutherland, Panuwat Trairatphisan, Hugo W van Kessel, Lukas S. Wijaya, +11 more
1citations -
Association of bronchial steroid inducible methylation quantitative trait loci with asthma and chronic obstructive pulmonary disease treatment response2022 Clinical and Translational Allergy article Medicine Asthma and respiratory diseases Open access
Elise M. A. Slob, Alen Faiz, Jos van Nijnatten, Susanne J. H. Vijverberg, Cristina Longo, Merve Kutlu, +29 more
1citations -
O-300 Characterization of the transcriptional changes of human endometrium across the window of implantation during natural cycles reveals consistent dynamics2025 Human Reproduction conference-abstract Immunology and Microbiology Reproductive System and Pregnancy Open access
Irene Miguel-Escalada, Berta Gayete-Mor, Lucía Álvarez-González, Marta Trullenque, Anna Blázquez, J J Guillén-Quílez, +7 more
0citations -
Genome- and transcriptome-wide association summary statistics for outcome from traumatic brain injury2022 Zenodo (CERN European Organization for Nuclear Research) dataset Medicine Traumatic Brain Injury Research Open access
Mart Kals, Kevin Kunzmann, Livia Parodi, Farid Radmanesh, Lindsay Wilson, Saef Izzy, +14 more
0citations -
Genome- and transcriptome-wide association summary statistics for outcome from traumatic brain injury2022 Zenodo (CERN European Organization for Nuclear Research) dataset Medicine Traumatic Brain Injury Research Open access
Mart Kals, Kevin Kunzmann, Livia Parodi, Farid Radmanesh, Lindsay Wilson, Saef Izzy, +14 more
0citations -
OP0243 SINGLE-CELL RNA SEQUENCING OF ACPA-ENRICHED B CELLS REVEALED A CD11c+ ATYPICAL B CELL GENE SIGNATURE IN RHEUMATOID ARTHRITIS2025 Annals of the Rheumatic Diseases conference-abstract Medicine Rheumatoid Arthritis Research and Therapies Open access
Yasuo Nagafuchi, Linda M. Slot, Deimantė Šimaitė, Aleida M. Bakker, Erik B. van den Akker, Tom W. J. Huizinga, +3 more
0citations -
Multi-Omics Dataset of Heat Stress-Induced Memory in Arabidopsis2026 Scientific Data data-paper Agricultural and Biological Sciences Plant Stress Responses and Tolerance Open access
Venkatesh P. Thirumalaikumar, Li’ang Yu, Devender Arora, Umrah Mubeen, Andrew A. G. Wiszniewski, Patrick Giavalisco, +4 more
1citations -
AAV6-based ZEB2 delivery promotes cardiomyocyte dedifferentiation in adult human myocardium2025 Cardiovascular Research article Biochemistry, Genetics and Molecular Biology Congenital heart defects research Open access
Rocco Caliandro, Azra Husetić, Merel L. Ligtermoet, Jermo Hanemaaijer-van der Veer, Karel van Duijvenboden, Lorena Zentilin, +6 more
2citations -
Consensus Transcriptional Landscape of Human End‐Stage Heart Failure2021 Journal of the American Heart Association article Medicine Cardiac Fibrosis and Remodeling Open access
Ricardo O. Ramirez Flores, Jan D. Lanzer, Christian H. Holland, Florian Leuschner, Patrick Most, Jobst‐Hendrik Schultz, +2 more
73citations -
Hypotaurine Reduces Glucose‐Mediated Vascular Calcification2025 Acta Physiologica article Biochemistry, Genetics and Molecular Biology Aldose Reductase and Taurine Open access
Marina Augusto Heuschkel, Armand M. G. Jaminon, Steffen Gräber, Anna Artati, Jerzy Adamski, Joachim Jankowski, +4 more
5citations -
Cell type heterogeneity in gene co-expression networks: implications for toxicological research2025 Briefings in Bioinformatics review Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Imke B. Bruns, Yingxue Li, James L. Stevens, Bob van de Water, Giulia Callegaro
5citations -
CEACAM6 Promotes Lung MetastasisviaEnhancing Proliferation, Migration and Suppressing Apoptosis of Prostate Cancer Cells2024 Cancer Genomics & Proteomics article Medicine Prostate Cancer Treatment and Research Open access
Alireza Azizi Saraji, Janine Stegmann-Frehse, Duan Kang, Anne Offermann, GEVORG SHAGHOYAN, Danny David Jonigk, +4 more
3citations -
Multiomics of iPSC‐derived ApoE3‐ and ApoE4 astrocytes and microglia uncovers cell type specific dysregulation of immunometabolism2023 Alzheimer s & Dementia article Medicine Alzheimer's disease research and treatments Open access
Rik van der Kant, Niek Blomberg, Lena Erlebach, Femke M. Feringa, Jorin Heijneman, Sascha Koppes, +11 more
1citations -
Impaired Metabolic Remodeling Characterizes Injured Niches during Post-ischemic Kidney Repair2026 Journal of the American Society of Nephrology article Medicine Acute Kidney Injury Research Open access
Rosalie G. J. Rietjens, Benedetta Manzato, Yuheng Liao, Wendy Sol, Ahmed Essam Mahfouz, Martin A. Giera, +4 more
0citations -
Antithrombin, Protein C, and Protein S: Genome and Transcriptome-Wide Association Studies Identify 7 Novel Loci Regulating Plasma Levels2023 Arteriosclerosis Thrombosis and Vascular Biology article Medicine Blood Coagulation and Thrombosis Mechanisms Open access
Yuekai Ji, Gerard Temprano‐Sagrera, Lori A. Holle, Allison Bebo, Jennifer A. Brody, Ngoc‐Quynh Le, +34 more
7citations -
Advances and challenges in cell–cell communication inference: a comprehensive review of tools, resources, and future directions2025 Briefings in Bioinformatics review Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Giulia Cesaro, James Shiniti Nagai, Gnoato Nicolò, Alice Chiodi, Gaia Tussardi, Vanessa Klöker, +6 more
48citations -
Glycosphingolipid-Glycan Signatures of Acute Myeloid Leukemia Cell Lines Reflect Hematopoietic Differentiation2022 Journal of Proteome Research article Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Di Wang, Tao Zhang, Katarina Madunić, Antonius A. de Waard, Constantin Blöchl, Oleg A. Mayboroda, +5 more
17citations