A scalable SCENIC workflow for single-cell gene regulatory network analysis

• Spatial profiling of the spleen in mouse and human myelofibrosis reveals complement-driven immune-stromal interactions as a therapeutic target

  2026 Cell stem cell article Medicine Myeloproliferative Neoplasms: Diagnosis and Treatment Open access

  2

  citations
• FOXP1 is differentially active during development of murine vasopressin and oxytocin magnocellular neurons

  2026 iScience article Psychology Neuroendocrine regulation and behavior Open access

  0

  citations
• Multiorgan Molecular Landscape of Severe COVID‐19 Revealed by Consensus Gene Signatures and RAB8B Targeting

  2026 Journal of Medical Virology article Medicine SARS-CoV-2 and COVID-19 Research Open access

  0

  citations
• FOXP1 differentially regulates the development of murine vasopressin and oxytocin magnocellular neurons

  2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Psychology Neuroendocrine regulation and behavior Open access

  0

  citations
• Exploring cellular changes in ruptured human quadriceps tendons at single‐cell resolution

  2025 The Journal of Physiology article Medicine Tendon Structure and Treatment Open access

  13

  citations
• An engineered tumor organoid model reveals cellular identity and signaling trajectories underlying SFPQ-TFE3 driven translocation RCC

  2025 iScience article Medicine Renal cell carcinoma treatment Open access

  5

  citations
• Integrative approaches to enhance reproductive resilience of crops for climate-proof agriculture

  2024 Plant Stress article Agricultural and Biological Sciences Climate change impacts on agriculture Open access

  43

  citations
• Intercellular interaction between FAP+ fibroblasts and CD150+ inflammatory monocytes mediates fibrostenosis in Crohn’s disease

  2024 Journal of Clinical Investigation article Biochemistry, Genetics and Molecular Biology Inflammatory Bowel Disease Open access

  50

  citations
• High-dimensional single-cell analysis of human natural killer cell heterogeneity

  2024 Nature Immunology article Immunology and Microbiology Immune Cell Function and Interaction Open access

  278

  citations
• High-Dimensional Single-Cell Analysis of Natural Killer Cell Heterogeneity in Human Blood

  2024 Research Square preprint Immunology and Microbiology Immune Cell Function and Interaction Open access

  3

  citations
• An engineered tumor organoid model reveals cellular identity and signaling trajectories underlying translocation RCC

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Renal cell carcinoma treatment Open access

  0

  citations
• SELENOP modifies sporadic colorectal carcinogenesis and WNT signaling activity through LRP5/6 interactions

  2023 Journal of Clinical Investigation article Biochemistry, Genetics and Molecular Biology Wnt/β-catenin signaling in development and cancer Open access

  26

  citations
• De-novoreconstruction and identification of transcriptional gene regulatory network modules differentiating single-cell clusters

  2023 NAR Genomics and Bioinformatics article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access

  8

  citations
• Cell type specificity of glucocorticoid signaling in the adult mouse hippocampus

  2021 Journal of Neuroendocrinology article Neuroscience Stress Responses and Cortisol Open access

  48

  citations
• Immunogenomic, single-cell and spatial dissection of CD8 + T cell exhaustion reveals critical determinants of cancer immunotherapy

  2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access

  7

  citations

15 results